Manihot esculenta (cassava): 110616949
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Entry
110616949 CDS
T05761
Name
(RefSeq) protein transport protein SEC13 homolog B
KO
K14004
protein transport protein SEC13
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03013
Nucleocytoplasmic transport
mesc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110616949
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110616949
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesc03019
]
110616949
04131 Membrane trafficking [BR:
mesc04131
]
110616949
Messenger RNA biogenesis [BR:
mesc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110616949
Membrane trafficking [BR:
mesc04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
110616949
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
110616949
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
110616949
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
110616949
NCBI-ProteinID:
XP_021615179
LinkDB
All DBs
Position
6:complement(2680077..2681851)
Genome browser
AA seq
298 aa
AA seq
DB search
MSPQKIETGHQDTVHDVAMDYYGKRIATASADHSIKIIGISNNTSQQLTAHQGPVWQVSW
AHPKFGSLLASCSYDGRVIIWKEGNQNEWTQAHVFDDHKSSVNSIAWAPHEVGLCLACGS
SDGNISVFTVRSDGGWDTSRIDQAHPVGVTSVSWAPSTAPGAFIGSSLLDPVQKLCSGGL
DNTVKVWKLDNGIWKMDCFPSLQMHTDWVRDVAWAPNLGLPKSTIASASQDGKVITWTVG
KEGDQWEGKILHDFKTPVWRVSWSLTGNVLAVADGNNNVTLWKEAVDGEWQQVTTIAS
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgtctccccagaagattgagactggtcatcaagacacagtccatgatgtggctatggat
tattatggcaagcgcattgcaactgcctcagctgaccactcaatcaagataattggaatt
agtaataatacttcccagcagctcactgcccatcaaggacctgtttggcaagtatcctgg
gctcacccaaagtttggatctttgcttgcttcatgctcatatgatgggcgtgtcataata
tggaaggaaggcaatcagaatgagtggactcaagctcatgtttttgatgaccacaaatca
tcagttaactctatagcttgggcacctcatgaggttggtctttgtttggcgtgtggctca
tctgatggaaatatatcagttttcactgtacgatctgatggtggatgggacacttcacga
attgatcaagctcacccagttggtgtaacttctgtttcttgggcaccatcaacagcacct
ggtgcttttattggttctagtttgcttgaccctgttcagaaactttgttctggtggtttg
gacaatactgtcaaagtgtggaagctcgacaatggaatttggaagatggattgctttcca
tctcttcaaatgcacactgattgggtaagagatgtggcatgggcacctaacttgggcctt
ccaaagtccaccattgcaagtgcttctcaagatgggaaggtgattacatggactgtggga
aaggaaggggatcaatgggagggtaagatcttgcatgattttaagactcctgtttggaga
gtctcatggtcgctcactggaaacgtattagctgttgctgatgggaataacaatgtcact
ctatggaaggaagctgtggatggggagtggcaacaggtgactacaattgcttcctag
DBGET
integrated database retrieval system
