Manihot esculenta (cassava): 110617091
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Entry
110617091 CDS
T05761
Name
(RefSeq) U1 small nuclear ribonucleoprotein A
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110617091
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mesc03041
]
110617091
Spliceosome [BR:
mesc03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
110617091
Complex B
110617091
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
DUF4523
xRRM
Calcipressin
RRM_YTH1
DUF1866
Motif
Other DBs
NCBI-GeneID:
110617091
NCBI-ProteinID:
XP_021615393
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All DBs
Position
1:complement(38848904..38851697)
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AA seq
254 aa
AA seq
DB search
MALLEQKNVADVNNVSTGTEVPPNVTIYINNLNEKIKIDELKKSLHAVFSQFGKILEILA
FKTLKHKGQAWVVFEDVQSATNAMRQMQSFPFYDKPMRIQFAKTKSDIIAKADGTFVPRE
KRKRHEEKGKKKKEHHDANQAGIGLAPAYAGAYGATPPLSQIPYPGGAKSMVPEAPAPPN
NILFIQNLPNETTPMMLQMLFQQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMHGLQGF
KIQQNTMLITYAKK
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgctagagcaaaagaacgtagcggatgtgaataatgtgagtacaggcactgaa
gtccctcccaacgtcactatttacattaacaatctcaacgagaaaatcaaaatcgatgag
ttgaagaaatccctccacgccgtcttctcccaattcgggaagattttggagattttggca
ttcaagacgctgaaacacaaagggcaagcttgggttgttttcgaggatgttcaatcagct
actaatgctatgaggcaaatgcagtctttccctttctatgacaagccaatgagaatacaa
tttgcaaaaactaaatcggatatcattgcaaaagctgatggcacttttgttccaagggaa
aaaagaaagaggcatgaagagaaaggaaaaaagaagaaagagcatcatgatgcaaatcaa
gctgggattggtctggctcctgcttatgctggtgcctatggtgcaactcctccgttatca
caaataccctatccaggtggtgcaaaatctatggttcctgaggctccagctccaccaaat
aatatactcttcattcaaaatctccccaatgagacaactccaatgatgctgcaaatgtta
ttccagcagtaccctggttttaaggaggttaggatggtggaaacaaagccagggattgcc
tttgtagagtatggagatgagatgcagtcaacagtcgcaatgcatggacttcagggtttc
aagatacagcaaaatacaatgttaattacttatgccaagaaatag
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