Manihot esculenta (cassava): 110617264
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Entry
110617264 CDS
T05761
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 5
KO
K05391
cyclic nucleotide gated channel, plant
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
110617264
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mesc04040
]
110617264
Ion channels [BR:
mesc04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
110617264
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
IQ
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
110617264
NCBI-ProteinID:
XP_021615631
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Position
6:9855443..9867136
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AA seq
732 aa
AA seq
DB search
MFDSGYKSQYLGGQREKFVRLDDLDSRLSSSSDTGVKKCGFGISHSGQGTNTTSRSFKKG
IRKGSEGLKSIGRSLRFGVSRAVFPEDLKVSEKKIFDPQDIFLLWCNRLFFISCILAVSV
DPLFFYLPVFNDSSHCLEIDRKLAITVTTLRTIIDAFYLIRMALQFRTAYIAPSSRVFGR
GELVIDPAQIAKRYLRQYFIIDFLSVVPVPQIMVWRFLQRSKGSDVMATKQALLLIIVLQ
YIPRFIRIIPITSEMKRTTGVFAETAWAGAAYYMLLYMLASHIVGAFWYLLAVERQDTCW
QKACSDPTTSNCDKNYLYCGNEHMNGYAAWSNISGDVLKNHCEAEENGPFDYGIYENALS
SGIASSKKFISKYCYCLWWGLQNLSTLGQGLQTSTYPLEVIFSIALAILGLILFALLIGN
MQTYLQSLTIRLEEMRVKRRDSEQWMHHRLLPQDLRERVRRYDQYKWLETRGVDEENLVQ
SLPKDLRRDIKRHLCLALVRRVPLFESMDERLLDAICERLKPCLFTENTYIVREGDPVDE
MLFIIRGRLESVTTDGGRSGFFNRSMLKEGDFCGEELLTWALDPKSGVNLPSSTRTVKAI
TEVEAFALIAEELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYSKRKNM
ELRRKEEEEVEADEVRSNASGGSYSIGATFLATRFAANALRGVHRNRNAKTARELVKLQK
PPEPDFSAEDAD
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacagtggttacaagtcgcaatacctgggtggccaaagagagaagtttgtcagg
ttggatgacttggattccagattatcatcatcttctgatacaggagtgaaaaaatgtgga
tttggcattagtcattccggtcagggaaccaatacaacatccagatctttcaagaaaggg
attagaaagggttctgaaggacttaagtctattggtcggtcacttagatttggggtatct
cgagcagtatttccagaggaccttaaagtttcagagaaaaaaatatttgatcctcaagac
atatttctcctgtggtgcaataggctattcttcatatcttgtattctagcagtttctgtg
gaccctctatttttttatcttccagtttttaatgattcatcacactgtcttgagatagat
cggaaattagcaattactgtgacaaccttgcggacaattattgatgctttctatctcatt
cgcatggctcttcagttccgaacagcttatattgctccctcttctcgtgtatttgggcga
ggtgaacttgtgatagatcctgcacaaatagcaaagagatacttgcgtcaatacttcatc
attgattttctttctgttgtccccgtaccacagattatggtttggagatttcttcaaagg
tcaaaaggttcagatgtcatggcgaccaagcaggccttgcttttgattatcgtgcttcag
tatattcctaggtttattcgtatcataccaataacttcagaaatgaaaagaacaacaggg
gtatttgctgaaactgcatgggcaggtgctgcgtattatatgctattatacatgcttgct
agtcatatagttggtgcattttggtatttgttagctgtagagcggcaggatacgtgctgg
caaaaggcttgtagcgatcctactacttcaaattgtgataagaattacttgtactgtggc
aatgaacatatgaatggttatgctgcatggagtaacatcagtggtgatgttcttaagaat
cattgtgaagcagaagaaaatggaccatttgattatggaatctatgaaaatgctttgtca
tctggcattgcctcttctaagaagttcatctctaaatactgttactgcttgtggtggggc
cttcagaatttgagtacacttggccaaggtcttcaaaccagcacatacccattagaggtt
atattttccatagcactagctatattggggctcatcctttttgctcttctgattggaaat
atgcagacctatcttcagtcacttactatacgattagaagaaatgagggtcaaaaggcgt
gactcagagcaatggatgcatcatcggttgcttccacaagaccttagggaacgggtgagg
cgctatgaccagtacaagtggttggaaacacgtggggtggatgaagagaatttggtgcag
agcctgccgaaggatcttaggagagacatcaaacgtcacctttgtttggcattggtgaga
agggttcctctattcgagagtatggatgaaaggttgcttgatgccatttgtgagcggctg
aaaccttgcttatttacagagaatacttacatagttcgagaaggagatccggttgatgaa
atgctttttatcatacgtggtcgccttgagagtgtaactacagatggtgggaggagtggt
ttcttcaaccgcagtatgctgaaggaaggagatttctgtggagaggagcttttgacatgg
gcattggatcctaaatctggtgtcaatctcccatcttctacccggacagtgaaggcaata
acagaagtagaggcttttgccctcatagctgaagagttgaaatttgtagcaagccagttt
aggcgtcttcacagccggcaagttcaacacacattccgtttttactcacagcagtggagg
acgtgggctgcttgctttattcaagctgcatggcgccgctattccaaaaggaagaatatg
gagcttcgtaggaaggaagaggaggaagtagaagcagatgaagtccgcagcaatgctagt
ggaggttcatacagcatcggcgctacctttttggctacaaggtttgcagccaatgctctt
cgtggcgttcatcgaaatcggaacgccaagactgctagggaattggtgaaactacagaag
cctcctgaacctgattttagcgctgaagatgcagattga
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