KEGG   Manihot esculenta (cassava): 110617338
Entry
110617338         CDS       T05761                                 
Name
(RefSeq) protein decapping 5 isoform X1
  KO
K18749  protein LSM14
Organism
mesc  Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mesc03019]
    110617338
Messenger RNA biogenesis [BR:mesc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     110617338
SSDB
Motif
Pfam: LSM14 FDF SM-ATX
Other DBs
NCBI-GeneID: 110617338
NCBI-ProteinID: XP_021615758
LinkDB
Position
6:complement(20985815..20991099)
AA seq 596 aa
MATENSTNSASTSRSNSTADSYIGSLISLTSKSEIRYEGVLYNINTEESSIGLKNVRSFG
TEGRKKDGPQIPPSDKVYEYILFRGSDIKDLQVKSSPPVQPTPPINNDPAIIQSHYPRPV
STPASLPPAVSGSLSEIGSHAAQMGLPGPNFQGGPPLYQPGGNLGTWGASPPPPNANGSG
LAMPMYWQGYYGPPNGLPHLHQQSLLRAPPGLSMPPPMQPMQYPNFNAALPTGASNLPTS
LSDIQSPLLSVGTSSLNLASTSSAPSTLPSTLPPGPSASLASETLPSLIPNKSPSSALPA
ANLSASLPALSPLTSSGPELNTIVPPISYKPGTQSTSSVVVSGSLRTETPTPSLITPGQL
LQSGSTTVPSSQPVQTAHKDVEVVQVSTTLSAEPSVPAVTEAQPPILPLPVPVRASHKPN
GAPFHSRHGYRGRERGRGTGSSRPVTKFTEDFDFMAMNEKFKKDEVWGHLGKSNKSHSKD
REDGKHSDEDDSQYEDDDELTKIEVKPLYNKDDFFDTLSCNALDHDSQNGRTRFSEQLKI
DTETFGDFQRYRGGRGGRGPPRGGRPYGSYHGRGYGYGYGYGYGGRGRGRAMPNRS
NT seq 1791 nt   +upstreamnt  +downstreamnt
atggctacggagaatagtaccaattctgcgtcgacttcgagatcgaattcgaccgccgat
tcttacattggcagtttgataagcttgacatccaagagtgagatcagatacgagggcgtt
ctctacaacatcaacactgaagagtccagtatcggactgaaaaacgtgcggtcatttgga
acagaaggacgtaaaaaggatggtccgcaaattcctcccagtgacaaagtttatgagtac
atattgttccgtggaagtgacatcaaggacctacaggttaagtcttctccccctgttcag
cctacgccacctataaacaatgatccagctattatacagtctcactatcctcgcccagtt
tctacacctgcaagcttgccgcctgctgttagtgggtctttgagtgagattggatcccac
gcagctcaaatgggactacccgggcctaatttccaaggtgggccgcctttatatcaacct
ggagggaacctgggaacatggggagcttcacctcctcccccaaatgcaaatgggagtggg
cttgctatgccaatgtattggcaaggttactatggccctccaaacgggcttcctcattta
caccagcaatccttgcttcgtgcgccacctgggctttcaatgccgcctcctatgcagcca
atgcagtatcccaattttaatgccgctttacccactggagcctcaaacttgccaacttcc
ttatcggatattcaatctcctttgctttctgttggtactagttcccttaacttagcatcc
acttcttcagcaccatcaactttgccttcaactttacctccagggccttctgctagttta
gcttcagaaacattacctagtttgattcctaacaagtctcctagttctgcacttcctgca
gccaatttaagtgccagcttaccggcactctctcctttgacttcttcaggcccagaatta
aataccattgtaccaccaatctcttataaacctggtactcaatctacatcttcagttgtg
gtctctggttctcttcgaacagaaacacctacaccttcattgataacccctggtcagctg
ttgcagtctggatcgactacggtcccttcatcacaacctgtccaaacagctcataaagat
gtggaggttgttcaagtatcaacaacattatcagcagaaccatcagtaccagctgttacg
gaagctcagccaccaattctcccattacctgttccagtacgggcaagtcacaagccaaat
ggagctccttttcattctcgtcatggttatagggggcgtgaaagaggaaggggaactggg
agttcacgtcctgtgacaaaatttactgaggatttcgattttatggcaatgaatgagaaa
ttcaagaaggatgaagtatggggtcatctcggtaagagcaacaaatctcattcaaaggac
agagaagatgggaaacacagtgatgaagatgattctcaatatgaagatgatgatgaattg
actaagattgaagttaagcctctttataacaaagatgactttttcgacacactctcctgc
aatgcgcttgatcatgattctcagaatggaaggaccagattctctgagcaactgaaaata
gacacagagacttttggggactttcaaaggtatcggggaggtaggggtggccgtgggcct
ccacgtggtggccgtccctatggatcttatcatggaaggggatatggctatggctatggc
tacggctatggtgggaggggccgtggccgggccatgcctaatcgttcttag

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