Manihot esculenta (cassava): 110617417
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Entry
110617417 CDS
T05761
Name
(RefSeq) calnexin homolog
KO
K08054
calnexin
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04141
Protein processing in endoplasmic reticulum
mesc04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110617417
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
110617417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
mesc03110
]
110617417
04131 Membrane trafficking [BR:
mesc04131
]
110617417
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
mesc04091
]
110617417
Chaperones and folding catalysts [BR:
mesc03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
110617417
Membrane trafficking [BR:
mesc04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
110617417
Lectins [BR:
mesc04091
]
Calnexin / calreticulin
110617417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
DUF4142
DUF6479
Motif
Other DBs
NCBI-GeneID:
110617417
NCBI-ProteinID:
XP_021615861
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All DBs
Position
6:25760713..25763918
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AA seq
539 aa
AA seq
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MGEAKRVSLRLALLFLVAFVSFSQLRASDDDKIFYESFEDSFEGRWVVSDKDDYKGVWKH
AKSEGHDEYGLLVSEKAKKYAIVKELDNPAILKGGTIVLQFETRFQNGLECGGAYLKYLR
PQGAGWTAKEFDNESPYSIMFGPDKCGATNKVHFILKHKNPKSGEYVEHHLKFPPSVPSD
KLTHVYTAILKPDNELQILLDGEEKKKANFLSSDDFEPPLVPAKTIPDPDDKKPEDWDER
AKIPDPNAVKPDDWDEDAPMEIEDDEAVKPEGWLDDEPEEIDDPEATKPEDWDDEEDGEW
EAPKIDNPKCEEAPGCGEWKRPMKRNPAYKGKWHAPLIDNPNYKGIWKPQEIPNPNYFEL
EKPDFEPIAAVGIEIWTMQDGILFGNILIADNEKVAESLRQTKWKAKFDVEKEKQKAEDA
AAGIDGLAGFQKKVFDLLYQIADISFLSQHKDKIIDIIEKAEKQPNLTIGILISIVVVIF
TVLLKIIFGGRKPAKVEDKPTPVAESSNKEGSSKEEAEEDEKEDDGGAAAAPRRRRREN
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgggagaagcgaaacgcgtctctctgcgattggctcttttgttcttggtagctttcgtt
tccttcagtcagctccgtgcctctgatgacgataagatcttttacgagtccttcgaggat
tcatttgaagggcgatgggttgtttctgataaagatgactacaaaggtgtatggaagcat
gcaaagagtgagggtcatgatgaatatggtcttcttgttagtgaaaaggctaagaagtat
gccatagtgaaagagctcgacaaccctgctattctaaagggtggaacaattgtccttcaa
tttgagactcgtttccagaatgggcttgaatgtggtggtgcataccttaaatacctgcgg
cctcagggagctggatggacagctaaagaatttgacaatgaatctccttattcaataatg
tttggacctgataaatgtggggccacaaacaaggtgcactttatcctaaagcataagaac
ccaaagagtggcgaatatgttgaacaccatctcaagttcccaccatctgtcccttcagac
aagcttactcatgtgtacactgctattttgaaacctgacaatgaactgcaaattttactt
gatggggaggagaaaaagaaggctaatttcctttcttcagacgattttgagcctcctcta
gttcctgccaagaccattcctgatccagatgataagaagcctgaggactgggatgagaga
gcaaaaattcctgatcctaatgcagtgaaaccagatgattgggatgaggatgcacctatg
gaaattgaagatgatgaagctgtgaaacctgaaggatggttagatgatgagcctgaggaa
attgatgatcctgaagccacaaaacccgaagattgggatgacgaggaagatggtgagtgg
gaggcaccaaagattgataatcctaagtgtgaggaagctcctggttgtggtgaatggaag
aggccaatgaagagaaatccagcttacaaaggaaaatggcacgccccactcattgacaac
cccaattacaagggtatatggaaaccacaggaaattccaaaccccaactactttgagctt
gaaaaaccagactttgagcccattgctgctgttggcattgagatatggactatgcaggat
ggcatcttgtttggaaatatcttgattgcagacaatgagaaggttgccgagtcactgagg
cagacaaagtggaaggcaaagtttgacgttgagaaagagaaacagaaggctgaggatgca
gctgctggtattgatggtcttgctggcttccagaagaaggtgtttgacctcctataccag
attgcagacatctctttcttaagtcaacacaaggacaaaattattgatattatcgagaag
gcagagaaacaaccaaacctcacaattggtatcctcatatccatcgtcgtcgtgatattt
accgttctccttaaaattatttttgggggaaggaagccagcaaaagtagaggacaagccg
acaccagttgctgagtcttcaaacaaggaaggaagcagcaaagaggaagcagaagaggat
gagaaggaagatgatggtggagcggctgctgctcctcgcagaaggagacgtgaaaactga
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