Manihot esculenta (cassava): 110617424
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Entry
110617424 CDS
T05761
Name
(RefSeq) EIN3-binding F-box protein 1
KO
K14515
EIN3-binding F-box protein
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04016
MAPK signaling pathway - plant
mesc04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
110617424
04075 Plant hormone signal transduction
110617424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mesc04121
]
110617424
Ubiquitin system [BR:
mesc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
110617424
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_RPS2
F-box-like
F-box
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
110617424
NCBI-ProteinID:
XP_021615870
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Position
6:complement(15751814..15755120)
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AA seq
655 aa
AA seq
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MPALVNYGGDDEFYSGGSFRTNPIDLGRFYSIGSHVDIYSPPCKRARVSSPFLYGILESE
QNKKPSIDVLPDECLFEIFRRIPGGKERSACACVSKHWLLLLSSIRKAEICKSKSTVADR
ETTVSVSHDVEMVSCDESGEIGSDGYLTRSLEGKKATDMRLAAISVGTSGHGGLGKLSVR
GSNSVRGVTNLGLSAIAHGCPSLKALSLWDVPSVGDEGLFEVARECHLLEKLDLCNCPSI
SNKGLIAIAENCPNLVALNVESCPKIGNEGLQAVGKFCPKLQSISIKGCPLVGDHGISSL
LSSSTSVLTKVKLQALNITDFSLAVIGHYGKAVTNLVLSSLQHVSEKGFWVMGNAQGLQK
LLSLTISSCRGITDVSFEAIAKGCTNLKQMCLRKCCFVSDNGLVSFVKAAGCLESMQLEE
CNRVTESGIVGVVSNCGTKLKALSLVKCMGIRDVASGMLGSSPCSSLRSLSIRNCPGFGS
ASLALVGKFCPQLQHVDLSGLCAITDSGLLPLLESCEEGLVKVNLSGCMSLTDKVVSALA
RMHGGTLELLNLDGCRRITDASLKSIAENCLFLSDLDLSKCAVTDSGIAVLASADQLNLQ
VLSLSGCSEVSNKSFPFLKKLGRTLVGLNLQNCSSISSSTIELLVENLWRCDILS
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcccttgttaactacggtggagacgatgaattctattctggtgggtcttttcgt
acaaatccaatcgatttgggtcgattttattcaattggctcccatgttgatatatacagc
cctccttgcaagcgggctcgtgttagttccccatttctttatggaattttggagtctgag
cagaataagaagccatcaattgatgtccttccagatgaatgcctttttgagatcttcagg
cgcatccctggaggcaaagagaggagtgcctgtgcttgtgtttccaagcactggcttttg
ctattgagcagtatccgaaaggctgaaatttgcaagagcaaaagcacagtcgctgataga
gagacaacagtttctgtttcccatgatgttgaaatggtgtcttgtgatgaaagtggggaa
attgggagcgatgggtacttgacgagatctttggaagggaagaaagcaacagatatgagg
cttgctgctatttctgtcggaactagtggccatggggggctaggcaagctttctgtccgg
ggaagcaactctgttcgtggagtcaccaaccttggtttatcagcaatagctcatgggtgc
ccatctttgaaggctctttctttatgggatgttccttctgttggggatgaaggtctattt
gaggtggccagagaatgccatttgttggaaaagcttgatctttgcaattgtccatcaatt
tccaacaagggtttgattgcaattgctgagaactgccctaacttggttgctttgaacgtt
gaatcttgtccaaagataggtaacgagggcttacaagctgttgggaaattttgccccaag
ttgcaatccatctccattaaaggctgccctcttgttggggatcatggaatatcaagttta
ttgtcatcatctacttctgtattaaccaaagtaaagcttcaggcactgaacatcacagat
ttctcccttgctgtaattgggcactatgggaaggctgttaccaatcttgtcctcagcagt
ctgcagcatgtgagtgagaagggcttttgggtcatgggtaatgctcagggtttgcagaaa
ttgttgtctttgactatttcttcttgtcggggaataacagatgtgagttttgaggctata
gcaaagggctgcacaaacctgaagcagatgtgccttcgtaagtgttgctttgtatcagac
aatgggctggtctcttttgtcaaagctgcaggatgtcttgagagcatgcaattggaagag
tgtaacagggttaccgaatcaggaattgttggtgtagtctccaactgcggaacaaagttg
aaagctcttagccttgtgaagtgcatgggaattagagatgtagcttcaggaatgctaggg
tcctctccttgtagctctcttcggtccctgtccattagaaattgcccaggattcggcagt
gcaagtttggctttggtgggcaagttctgccctcagcttcagcatgtagatctgagtggc
ctttgtgctattacagattcagggcttcttccactcttggagagttgtgaggaaggactt
gttaaggtgaatcttagtggctgcatgagtttaacggacaaagtagtttcagccttggct
aggatgcatggtggaactcttgaattgctgaatctggatggttgcagacggattactgat
gcaagtttgaagtcaattgctgaaaattgtttgtttctcagtgatctggatttgtccaaa
tgtgctgtcactgattctggaattgcagtcctggctagcgcagatcagctcaaccttcaa
gtcctttccctgtccggttgttcggaagtatcaaataagagcttccctttcctaaagaaa
ttgggcaggaccttggtggggttgaatcttcaaaactgcagttctatcagcagcagcaca
attgagctactggtggagaacttgtggagatgtgatatcctctcctaa
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