Manihot esculenta (cassava): 110617494
Help
Entry
110617494 CDS
T05761
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110617494
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesc03019
]
110617494
03012 Translation factors [BR:
mesc03012
]
110617494
Messenger RNA biogenesis [BR:
mesc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
110617494
Translation factors [BR:
mesc03012
]
Eukaryotic type
Release factors
110617494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
G-alpha
Motif
Other DBs
NCBI-GeneID:
110617494
NCBI-ProteinID:
XP_021616006
LinkDB
All DBs
Position
6:1403192..1422694
Genome browser
AA seq
525 aa
AA seq
DB search
MVYLWLLFVLMVDIEEEIRSLQLDSAAEDNTGVINPEDAKLEEVEKLDRMEEDSKDDVSL
NSKDVQAESKVKDKAVSAPGDVETPDEMEEDNKKRHLNVVFIGHVDAGKSTTGGQILFLS
GQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERVKGKTVEVGRAHFETETTRFTILD
APGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVSKLLVV
VNKMDDPTVNWSKERYDEIESKMIPFLKSSGYNVKKDVLFLPISGLLGTNMKTRIDKSVC
SWWNGPCLFEALDAVEVPLRDPKGPFRMPIIDKFKDMGTVVMGKVESGSITEGDSLLVMP
NKTQVKVVAVYCDETKVRCAGPGENLRVRLSGIDDEDILAGFVLSSIAKPIASVTEFVAQ
LQILELLDNAIFTAGYKAVLHIHSVVEECEIVELLQQIDPKTKKPMKKKVLFVKNGAVVV
SRVQVNNMICIEKFADFPQLGRFTLRTEGKTVAVGKVTGLPSVSS
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggtttacctgtggttactctttgttttgatggtagatattgaggaggagattcgctcg
ttacaacttgactctgcagcagaagataatactggagttattaacccagaagatgcaaag
ttggaggaagtggagaagttggatagaatggaggaagattctaaagatgatgttagtctc
aactctaaggatgtgcaggctgagtccaaagtaaaagataaggcagtatctgctccagga
gatgttgaaacaccagatgagatggaagaagacaataagaagcggcacttgaatgtggtt
tttattggccatgttgatgctggcaagtccacaactggagggcagatacttttcttaagc
ggtcaggttgatgatcggacaatccaaaaatatgagaaagaagctaaggacaagagtaga
gaaagctggtacatggcatatattatggatactaatgaagaggagagggttaagggtaaa
acagttgaagtgggaagagcacattttgaaacagagacgactagatttacaattttagac
gcaccgggtcacaagagttatgttcctaatatgattagtggagcctctcaagctgatatt
ggtgtactggtgatttctgctcggaaaggagaatttgaaactgggtatgaaagaggtggg
cagacccgtgaacatgttcagcttgcaaagacattaggggtctcgaagcttctcgtcgtt
gtaaataaaatggatgatcccactgtgaactggtcaaaagaaaggtatgatgaaattgaa
tcaaagatgataccgtttctaaagtcttcaggctataatgtgaagaaagatgtcctgttc
ctaccaatatctgggctgcttggtacaaatatgaaaactagaatagataaaagtgtgtgt
tcatggtggaatggcccgtgtctttttgaagctctagatgctgttgaggttcctctacga
gatccaaaaggtccttttaggatgcctattattgacaaatttaaagatatgggaactgta
gtcatgggcaaagtagaatctggtagtattactgagggcgattccttgttggtcatgcca
aataaaactcaggtgaaagttgttgctgtatattgtgatgaaaccaaagttaggtgtgcg
gggcctggagaaaatcttcgtgttagattatctgggattgatgatgaggatatattggca
ggttttgtcttgtcaagtattgcaaagccaatagcttcagttacagaatttgttgctcaa
ctgcaaatccttgaattgctggacaacgcgatttttacagctggctataaggctgttttg
cacattcattctgtagttgaggaatgtgagattgttgaactgctacaacaaattgatcca
aagacaaagaaacctatgaaaaagaaagtcctctttgtgaagaatggtgctgttgttgtg
tctcgcgttcaggtaaataacatgatatgcattgagaagtttgcagattttcctcaactt
ggcaggtttactcttcgtactgaagggaaaacagttgctgtggggaaagtcactggactt
ccttcagtttctagttaa
DBGET
integrated database retrieval system
