Manihot esculenta (cassava): 110617624
Help
Entry
110617624 CDS
T05761
Name
(RefSeq) protein TSS
KO
K03255
protein TIF31
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
mesc03012
]
110617624
Translation factors [BR:
mesc03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
110617624
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_10
eIF3_p135
TPR_NPHP3
CLU_N
TPR_2
CLU
TPR_9
TPR_MalT
TPR_8
PAM2
Motif
Other DBs
NCBI-GeneID:
110617624
NCBI-ProteinID:
XP_021616236
LinkDB
All DBs
Position
6:8468182..8486431
Genome browser
AA seq
1877 aa
AA seq
DB search
MAPKTGKAKPHKAKGDKKKKEDKVLPAVIEITVETPDDSQVTLKGISTDRILDVRKLLGV
NVETCHLTNFSLSHEVRGPRLKDSVDIVSLKPCHLTIVEEDYTELQAVAHIRRLLDIVAC
TTSFGPSSSKPAARINSKESSTKDTGLTEAEPTQSLDSSDSGSDSNTKLKRGGGDKKADG
ANCKIEKDGCKDVEEKGDTAVSMCPPPRLGQFYDFFSFSHLTPPVQYIRRSTRPFLEDKK
EDDFFQIDVRVCSGKPMTIVASRKGFYPSGKRLLLCHSLVSLLQQISRTFDTAYKALMKA
FAEHNKFGNLPYGFRANTWVVPPVVADNPFVFPPLPIEDENWGGNGGGQGRDAEHDHRHW
AKEFAILAAMPCKTAEERQTRDRKAFLLHSLFVDVSVFKAVAAIKRIIDNNQYSLSDPTH
LVLHEEKVGDLIIKVARDVPDASIKLDCKNDGSRVLGLSQEELAKRNLLKGITADESATV
HDISTLGVVVIRHCGYTAVVKVSDEVNWEGKPIPQDIDIEEQPEGGANALNVNSLRMLLH
KSSTPQSSSIVQRVQTGDSECLHSARSLVRKVLEDSLLKLQEETNKHTTSIRWELGACWV
QHLQNQASGKTESNKTEEAKPEPAVKGLGKQGALLKEIKKKMDVRSSKIEEGKEVSVDNP
NMNKNLDGNQKELEKKELEMETMWKKLLPEAAYFRLKESETGLHLKSPGELIEMAHKYYA
DTALPKLVADFGSLELSPVDGRTLTDFMHTRGLQMCSLGRVVELADKLPHVQSLCIHEMI
VRAYKHILQAIVAAVNNVADLAASVASCLNILLGTPSSENDCTEIVNDDKLKWKWVETFL
LKRFGWKWKHESCQNLRKFAILRGLSHKVGLELLPRDYEIDTASPFKKTDIISMVPVYKH
VACSSADGRTLLESSKTSLDKGKLEDAVNYGTKALSKLVSVCGPYHRMTAGAYSLLAVVL
YHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVNRALY
LLHLTCGPSHPNTAATYINVAMMEEGLGNVHLALRYLHEALKCNQRLLGADHIQTAASYH
AIAIALSLMEAYSLSVQHEQTTLQILQAKLGSEDLRTQDAAAWLEYFESKALEQQEAARN
GTPKPDASISSKGHLSVSDLLDYITPDADMKAREAQKKARSKVKGKAGQNWETVSDESQK
DETSSPTYPVVENSSDKENKSEVQFAEIRNESTDSSLPDQSIINLSDEKTQEDESNEGWQ
EAVPKGRSPTSRKSSRRPSLAKLNTNFMNVSQLPRFRGKPTNFTSPRTSPNDSAASSGPS
IPVPKKFIKSASFSPKQNNSSATAGGSEKSINPKSAPATPASTDQNSKSAPVASSVSVQV
AGRLFSYKEVALAPPGTIVKAVAEQLPKENLPIEPSHQLSQKTATSEDIVGGVTELKDAE
KENVKNPEGERKPHSSYERKDPINAEPETEGNSEMMEPPEEKKCVHADHIEKEAVVLENK
TANIEVTNGAVLGPENLDTSKESNATSPKSGVLETRDLENCLPVSHDPEPLSVLSENAAL
LLEKDTSAPSEKLTDENSQDLFKDCTTDKPVTIEGEKQDESESGKETTKKLSAAAPPFNP
STVPVFGSVTVPGFKDHGGILPPPVNIPPMLTVNPVRRSPHQSATARVPYGPRLSGGYNR
SGNRVPRNKPTFHSGEHNGDGNHFSPPRIMNPHAAEFVPGQPWVPNGYPLSPNGYLANPN
GFSMSPTGIPVSPNGFPASLNGTAAAENGFPATPVNSVETPTLVPIDIGADNKGEAGGET
SAENSLAENQPSEQKYHDKPDEIVCPETEEKPTSTVPLSGETAMAKETYNSVLIEEKPSK
CWADYSDSEAEIVEVTS
NT seq
5634 nt
NT seq
+upstream
nt +downstream
nt
atggctcccaaaactggtaaggcaaaaccacataaagccaaaggagacaaaaagaagaag
gaagacaaagttttacctgctgttattgaaattacagtggaaacaccagatgactcacaa
gttaccctcaagggtatctcaacggacaggatattggatgtgagaaagctcttaggtgtc
aatgtcgagacatgccatctgaccaatttctctctatctcacgaggtacgaggaccaaga
ctcaaggattcagtggacatcgtctctctcaagccctgccacctcaccatcgttgaagag
gactatacggaattgcaagccgtcgctcacatccggcgactcctcgacatcgtcgcctgt
accacctcgtttggtccatcatcgtccaaaccagccgctcgaatcaattcgaaggagtcc
agtacgaaggacaccggtttgacagaggctgaaccgactcagagtttggattcttcggac
agtggaagcgattccaataccaagttgaaaagaggaggaggagataagaaagccgatggg
gctaactgcaaaatcgagaaggatggctgtaaggacgtggaggagaagggagacacggcg
gtttcaatgtgtccgccacctcggctcgggcagttctacgatttcttctcgttttcacac
ctcacgccgccagttcaatacattaggagatccacacgtccgttcctggaggataaaaaa
gaagacgatttcttccagatagatgtaagagtttgcagtgggaagccgatgacaattgta
gcttcgcggaaagggttttatccttctggaaaacgtctccttctctgtcattctttggtt
tctctactccagcagattagcaggacctttgatactgcgtacaaggctcttatgaaagct
tttgcagagcacaataaatttgggaatcttccttatggttttcgggcaaacacatgggtt
gttcctccggttgttgctgataatccatttgttttccctcctcttcctattgaagatgag
aactggggaggaaatggagggggacaaggaagagatgctgaacatgatcacaggcattgg
gcaaaggagtttgcaatcctggcagcaatgccttgtaaaacggcggaggagaggcaaaca
cgagataggaaagcctttctgcttcacagtttattcgtcgacgtctctgttttcaaagct
gttgcagcaatcaaacgtattattgacaacaatcagtactctttaagtgatcccacccat
ttggttttgcacgaggaaaaagtgggagatttgattatcaaggtggcaagagatgttcct
gatgcaagtataaagttggattgtaaaaacgatggtagtagagttcttggattgtcacag
gaagagcttgccaagagaaatttacttaaaggcataactgctgatgaaagtgcaactgtc
catgatatctctactttaggtgttgtggttattagacattgtggctacacagctgttgtt
aaagtttcagatgaggtcaattgggaggggaagcctattccacaggacattgacattgaa
gagcaacctgaaggaggtgccaatgccttgaatgttaatagcttgagaatgctattgcac
aagtcatccacgccgcagtcatctagtatagtccagcgagtgcagactggagattctgag
tgtttacattctgctaggtctttggttaggaaagtattagaagatagtctgctgaagtta
caggaagaaaccaataagcacactacatctatcagatgggagctaggagcatgttgggtt
caacatttgcaaaatcaggcttcagggaaaactgagtctaataaaactgaagaagctaag
cctgagcctgctgtaaagggacttggaaagcaaggtgcattgctcaaggaaataaagaaa
aaaatggatgtcagaagcagcaaaattgaagagggaaaagaagtttctgtggataatcct
aacatgaacaagaacttggatggaaatcagaaagaattggagaaaaaagaattggaaatg
gaaaccatgtggaaaaaacttctccctgaagctgcatattttcgccttaaagaatcagaa
actggtcttcacctcaagtctcctggtgaattgattgaaatggcacataaatactatgcc
gatacagctcttcccaaactggtggctgattttggctcccttgaactttcaccagttgat
ggaagaactttgacagattttatgcataccaggggtttgcagatgtgttctttagggaga
gtggtggaacttgcagacaaacttccccatgtgcaatcactctgtatacatgaaatgatt
gttcgagcctacaaacacatattacaagccattgtagctgcagttaataatgttgctgac
ttggctgcatcagttgcatcatgtctaaatatattattaggaacaccttcatctgaaaat
gattgtacggaaattgtaaatgatgataaactgaagtggaaatgggtggaaactttcctc
ttaaaaaggtttggatggaagtggaagcatgaaagctgccagaatctgagaaagtttgca
attcttcgtggcttgtcccataaggttggacttgagcttcttcctagggactatgagata
gacactgcatccccctttaagaagacagatatcataagcatggtccctgtgtacaagcat
gttgcatgttcatctgcagatggacgcacattgttagaatcttctaaaacttccttggat
aaaggtaaactggaggatgctgttaattatggcactaaggcactgtcaaaacttgtgtca
gtctgtggcccttatcatcgaatgacagcaggagcttatagtctactggctgtagtgctt
taccacactggagattttaatcaggcaaccatttatcagcaaaaagcattggatattaat
gagagggaacttggacttgatcatcctgatacaatgaaaagttatggagatctagctgtc
ttctactatcgtcttcaacatacagaattagccttaaagtatgtcaatcgtgcattgtat
cttttgcatctaacgtgtggaccatctcatcccaatacggctgccacctatatcaatgta
gcaatgatggaagaaggattggggaatgtccatctcgctcttaggtacctccatgaggct
ttgaagtgtaaccagagactacttggtgctgatcatatacagactgctgccagctaccat
gctatagcaattgctttatctttgatggaagcttactccttaagtgttcagcatgaacaa
actacactacagatactacaagcgaaacttggatctgaggatctacgcacacaggatgca
gctgcatggctcgagtattttgagtccaaggctctggagcagcaagaagctgcacgcaat
ggaactccaaagcctgatgcctcaatatctagtaaaggtcatttaagtgtatcggatctc
ttggattatataacaccagatgcagatatgaaagcaagagaagctcaaaagaaagctcgt
tcaaaggttaaaggcaaagcaggccaaaactgggaaacagtctcagatgaatctcagaag
gatgaaacttcatcaccaacctatcctgttgtggagaattcaagtgataaggaaaacaaa
tctgaggttcaatttgcagaaattaggaatgagagtactgattcaagtctcccagatcaa
tcaataatcaatttaagtgatgaaaaaacacaggaggatgagtcaaatgaaggatggcaa
gaagctgtacctaaaggccgttcacctacaagtcgcaaatcctcaaggaggccaagctta
gctaaactaaataccaactttatgaatgtgtcccagttgccaagattccgaggaaagccc
accaattttacatcaccaaggacaagcccaaatgattcagctgcttctagtggacccagt
attcccgttcctaagaagtttattaaaagtgcaagcttcagtccaaagcaaaataattct
agtgccactgccggtggatcagagaaatcaatcaaccctaaatcagctccagctactcct
gcttcaactgaccagaattccaaatcagctccggtggcaagttctgtaagtgttcaggta
gctggaagacttttctcctacaaggaagttgctttagctcctcctggtacaatcgtgaag
gctgtggcagaacagctgccaaaagaaaatcttcctatagaaccaagtcatcagttaagc
caaaagacagctacatcagaggatattgttggtggggtgacagaactgaaagatgcagag
aaagaaaatgtgaagaacccagaaggagagagaaaaccacatagttcttatgaaagaaaa
gatcctatcaatgcagagccagaaacggaggggaattcagagatgatggaaccaccggaa
gaaaaaaaatgtgtgcatgctgatcacatagaaaaagaagccgtggtacttgaaaataaa
actgctaatatcgaagttacaaatggtgcagttctgggacctgagaatttagacacttcc
aaagaatcaaatgccacttctcccaaaagtggtgtgttggaaacaagagacttagagaat
tgcctaccagtttcccatgatccagaacctttatctgtgctatctgaaaatgcagctttg
ttgctagagaaagatacttcagctccaagtgaaaaactaacagatgagaattcacaggat
ttgttcaaagactgcacaactgataagccagtgacaattgaaggagaaaaacaagatgaa
tcagaatcaggaaaggagacaacaaagaaactttccgcagctgcaccaccatttaatcca
tccacagttccagtttttggctcagttaccgttccagggttcaaagatcatggaggaatt
cttcctccaccagtgaatattcctccaatgcttacagttaatcctgtccgcagatcacct
caccagtcagcgacagctagggttccttatggtccaaggctatctggtggctataataga
tctggaaatcgggttccacgtaacaaacctaccttccacagtggggagcataatggggat
gggaatcacttcagcccgccaagaataatgaaccctcatgctgctgaatttgtgcctggc
caaccttgggttcccaatggctaccctttgtcaccaaatggttacttggctaacccaaat
ggtttctccatgtctcctacaggcattccggtgtcaccaaatggatttccagcatcatta
aatggtactgcagcggctgaaaatggcttcccagcaactccagtgaattcagtagaaaca
cccacattggttcccattgacataggtgctgacaacaaaggtgaagctggaggagaaact
agtgctgaaaattccctggcagaaaaccagccgagtgagcaaaaatatcacgacaaacca
gatgaaattgtgtgtcctgaaactgaagaaaagcctacaagtacagtcccattgagtggt
gagactgctatggcaaaagaaacgtacaatagcgtattgattgaggagaagccaagcaag
tgctgggcagattacagtgacagcgaagctgagattgttgaggttactagttga
DBGET
integrated database retrieval system
