Manihot esculenta (cassava): 110617659
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Entry
110617659 CDS
T05761
Name
(RefSeq) cyclic nucleotide-gated ion channel 17
KO
K27629
cyclic nucleotide gated channel 17
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04075
Plant hormone signal transduction
mesc04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
110617659
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
110617659
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mesc04040
]
110617659
Ion channels [BR:
mesc04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
110617659
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
110617659
NCBI-ProteinID:
XP_021616294
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Position
6:complement(7691290..7708473)
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AA seq
725 aa
AA seq
DB search
MELKKGKLVRFYSDGKQYRETSWGKNDLVHPEVSSADNVPSSLLKADNGMVGGRNRLTET
NKVGKSKIFPVDHPSWHQRMLDPGSDIVLRWNRIFLVSCLLALFVDPLYFYLPTVGGDKE
SSCVNSDSNLRIVVTFFRTVADLFYLLHMIIKFRTAYVAPNTRVFGRGELVMDPKKIARR
YIRSDFFIDLIATLPLPQIVVWFIIPAARSRKADHKNNALALIVLLQYIPRLYLIFPLSS
EIIKAAGVVTRTAWAGAAYNLLLYMLASHVLGAAWYLLSVDRYKSCWKSNCKDENDPIKC
FLNYLDCDTFNHGDRKTWAKSTNVFKNCDPNNNISFDYGIFKDAVSKTVVSSKFIEKYFY
CLWWGLQQLSSYGQNLSTSTYIGETSFAILISILGLVLFAHLIGNMQTYLQSLTVRLEEW
RLKRRDTEEWMRHRQLPEDLRKRVRRFVQYKWLATRGVNEESILSGLPADLRRDIQRHLC
LDLVLRVPFFSQMDDQLLDAICERLVSSLSTADTYIVREGDPVTEMLFIIRGRLESSTTN
GGRTGFFNSITLKPGDFCGEELLAWALHPKSSLNLPSSTRTVKALNEVEAFALRAEDLKF
VANQFRRLHSKKLQHTFRYHSHHWRTWAACFIQAAWLRHKRRMTENNLIISESFALDGKV
ANETGREEGCHCSESPRSQAKMNLGVTILASRFAANTRRGAQKIKDAEMPMLRKPDEPDF
FAEDE
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggagttgaagaagggcaagcttgtgaggttttactctgatggaaaacaatatagagaa
acatcatggggaaaaaatgacctggtacatccagaggtgtcttctgctgacaatgttccg
tcttcattgctaaaagcagataatggaatggttggtggtagaaatagattaacagagact
aataaagttgggaagtctaagatttttccagtggaccatccatcatggcatcaaaggatg
cttgatccaggaagcgatattgtgctccgatggaacaggattttccttgtctcatgcctg
ttggcactttttgttgacccactgtatttttacttgcctactgttggaggggataaagaa
tcttcatgtgtcaatagtgactcaaacttgcgaatagttgttacgttttttcggactgtt
gcagatcttttttatttgttgcacatgataataaagttcaggactgcttatgttgcccca
aacactcgtgtgtttgggaggggtgaacttgttatggatccaaagaagattgcacggaga
tatattaggtctgacttcttcattgatctcattgctactctgcctctacctcagattgtc
gtctggtttatcataccagcagcaagaagtcgtaaagctgatcataagaacaatgcactt
gcattaatagttctgctacaatatattcccagattatatctgatatttcctttgagttct
gaaatcattaaagctgctggagtagttacaagaacagcttgggcaggtgctgcatataat
ttgctactgtacatgttagcaagccatgttttaggagcagcatggtatttgctatctgtt
gacaggtataaatcttgctggaaatcgaattgtaaagatgaaaatgaccctatcaaatgt
ttcctcaattatcttgattgtgatacctttaatcatggtgatcgcaagacctgggcaaaa
agcacaaatgtcttcaagaactgtgatccaaacaataatatctctttcgattatggtata
tttaaagatgcagtgtcaaaaacagttgtctcctctaagttcattgaaaagtatttctat
tgcttgtggtggggcttacaacaactaagttcatatgggcagaatttgtcaactagcaca
tatattggcgagacgtcatttgccatactcatttccatcttgggtcttgttctctttgca
cacttgattggcaatatgcagacataccttcaatctcttaccgtgagacttgaggagtgg
aggcttaagcgaagagatactgaggagtggatgaggcatcgccaactcccagaagatttg
agaaaacgggttcgacgctttgttcaatataagtggcttgcaactcgaggagtaaatgaa
gaatctatcctgagtggtttgcctgctgatcttcggcgtgatatccagcgccacttatgc
ttggaccttgttctacgtgtccctttcttctcacagatggatgatcagttgcttgatgca
atttgtgagcgtctagtatcttctcttagcactgcagacacctatattgtacgtgagggt
gatcctgtaactgaaatgctatttattatcaggggcagactcgagagttctactaccaat
ggagggcgcactggtttctttaactcgattactttgaaacctggggatttttgtggagag
gagctactggcatgggcattgcatccaaaatcttccctcaacttgccttcctcaactagg
acagtcaaagctctaaatgaagttgaagctttcgcattgagagctgaagatctaaagttt
gtcgccaaccagttcagacgtctccatagcaaaaagctacagcatacattcaggtatcat
tcccatcattggaggacatgggcagcctgtttcatacaggctgcttggcttcggcacaag
agaaggatgacagagaataacctcatcatttcagaatcttttgctttggatggaaaagtg
gctaatgaaacagggcgagaggaaggttgccactgttcagaaagtccaaggtctcaagca
aaaatgaaccttggtgtcacaatactggcctcaagatttgctgcaaacacaaggagagga
gctcaaaagattaaggacgctgagatgccaatgctacggaagcctgatgaacctgacttt
tttgctgaagatgaatag
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