Manihot esculenta (cassava): 110617663
Help
Entry
110617663 CDS
T05761
Name
(RefSeq) RNA-binding KH domain-containing protein PEPPER isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesc03019
]
110617663
Messenger RNA biogenesis [BR:
mesc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
110617663
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
MOEP19
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
110617663
NCBI-ProteinID:
XP_021616299
LinkDB
All DBs
Position
6:3420555..3434504
Genome browser
AA seq
528 aa
AA seq
DB search
MATTAEPETTANGSQNPSEYDTQTIAITTTTTTIAEAPEADTAEPDRLTQNPELDSSSSA
PQPSTATSTTTVKWPGWPGDCVFRLIVPVLKVGSIIGRKGDLIKKMCDETRARIRVLDAP
VGTPDRVVLISGKEEPEAPLSPAMDAAIRIFKRVTGFPESDAKASGAAGIAFCSIRLLVA
STQAINLIGKQGSLIKSIQESTGASVRILSEDEVPFYVAADERIVDLQGEALKVLKALEA
IVGHLRKFLVDHSVLPLFEKNYNALISQERQAEMWSDKSLLHANAQGGSDTDYPLSAKRE
SLFFEVETPFESQIPPSRISLYGQDPAVTSIRSSVLNRASGPVVTQTENSISLPPLDWSL
CLLPLCSESFYSLQTTNVIKARGDTKATGVSYRLKHEASQHLFEVTQTMQVPISYAEEII
GIGGNNIAYIRRTSGAIITVQESRGYPDEITVEIRGTSSQVQMAQQLIQEFLSNHREPVS
SSYSMYEPGLRSVYSQMDSTRYSSSSLSGQSYGGYGSSGLGGYSSFRL
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggccaccaccgctgaaccagagactacggccaacggctcccagaatccatcagagtac
gacacacaaaccatcgccatcaccactactacaacaacaatagcagaagcaccagaagca
gacactgcggaacccgaccgattaacccaaaaccctgagctcgattctagttcttctgca
ccgcaaccttccactgctacttccactaccaccgtgaagtggccgggttggcctggggat
tgtgttttcaggttgattgtgccggtgcttaaagtgggcagcattattgggcgtaagggt
gaccttattaagaagatgtgcgatgaaactcgagctcgcattcgcgtgcttgatgcgccc
gttggcactcctgaccgagtagtgttgatatctggaaaggaagagccagaggcacctcta
tcccctgcaatggatgctgcgataagaatctttaaacgtgttactggatttcctgagagt
gatgctaaagcatctggagctgctggtattgctttttgttcaattcggttgttggtggca
tccacacaggctattaatttgattggaaagcagggctcattaatcaagtcaatacaagag
agcactggtgcatctgtgcggatattgtcagaagatgaagtgccattttacgttgctgca
gatgagaggattgtagatctgcagggagaagccttgaaggtccttaaggctttggaagca
atagtgggtcacttgaggaagtttttggttgatcatagtgttcttcctctttttgaaaag
aattacaatgcattaatctcacaggaacgccaagcagagatgtggagcgacaagtccttg
ctgcatgctaatgctcaaggtgggagtgacactgattatcctctctcagcaaagagggag
tctttgttctttgaagtagaaactccatttgagtcgcagatcccaccctccagaatttca
ctctatggacaagatcctgcagttacgtcaatacgatcttctgtactcaatcgtgctagt
ggtcctgtagtcactcagactgaaaactcaatatcattgccgcctcttgattggtctctt
tgcctacttcctctttgctcggagtcattctattccctgcagacaaccaatgttatcaag
gcaagaggtgacactaaagcaacaggggtctcctaccgccttaagcatgaggcgagtcaa
cacctttttgaggtaacacaaactatgcaagtaccaatttcttatgctgaggaaatcatt
gggattggaggcaataatattgcatatatccgtcgcactagtggagccataataactgtg
caagaaagcaggggatatcctgatgaaataactgtggagatcagaggcacatcatcacag
gttcagatggctcaacaactgattcaggaatttttaagcaatcacagagaaccggtctcg
agcagctatagcatgtatgagccaggactgaggtctgtgtactctcagatggacagcaca
cgatattcttcatcttcgttgtctggacaatcgtatggcggatatggatcttctggtcta
ggaggctatagtagctttagactctga
DBGET
integrated database retrieval system
