Manihot esculenta (cassava): 110617778
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Entry
110617778 CDS
T05761
Name
(RefSeq) autophagy-related protein 18b
KO
K17908
autophagy-related protein 18
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
110617778
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mesc04131
]
110617778
03029 Mitochondrial biogenesis [BR:
mesc03029
]
110617778
Membrane trafficking [BR:
mesc04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
110617778
Mitochondrial biogenesis [BR:
mesc03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
110617778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_Prp19
WD40_WDHD1_1st
WD40
Beta-prop_Vps41
Beta-prop_EML_2
WD40_CDC20-Fz
BCAS3_WD40
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_RSE1_2nd
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
110617778
NCBI-ProteinID:
XP_021616463
LinkDB
All DBs
Position
6:8730676..8751179
Genome browser
AA seq
372 aa
AA seq
DB search
MTTESSSNSSIFCASFNQDNSGFAVSTRDGFKIFDPNSGRLCYERAVGAFIIVEMLYSSS
LLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFLTSILAVRLNRKRLVVVLQEKTYIYD
SNSLAILDTLDTVPNTKGLCAFSPSLDGCFLALPASTTKGSVLVYNVMELQSHCEIDAHR
APLAAVTLSSNGMYIATASEQGTIIRVHLVLEATKSYSFRRGTYPSTIFSLSFGPSMQLP
DILVAASSSGSIHVFSLSFAINQRSRRSSSLLGSILPDSVNDALDPAHHHVLHNAVPAGV
KSYVVVRKVDKAADTSTEFVACRATLSIITFNGYFQEYIVNINNQNESKWTLEREFNLLP
AISGEEQHFQLV
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgactaccgagtcctcctccaactcttcaatcttctgcgcttctttcaatcaagataac
agtggttttgcagttagcactcgtgatggcttcaaaatttttgatccaaactctggtcgt
ctctgttatgaacgagctgttggagcttttatcatagttgaaatgctgtatagttctagt
cttcttgctattgttggagctggtgagcagccttctttatccccacggcgtctttgtttg
ttcaatactaccactggaactgctctccgggaattgaattttttaacttcaattcttgct
gttcgtttaaatagaaaaaggcttgttgttgttttgcaagaaaagacttacatttatgac
tcaaatagtcttgcaatactggatactcttgatacagttccaaacacaaaaggactatgt
gcattctcccccagtttggatggttgttttttggctcttcctgctagtacaaccaaagga
tcagttttggtctataatgtcatggaactccagtcacattgtgagatagatgctcatcgt
gcgccactggctgcagttaccctttcttcaaatggaatgtacattgctacagcatctgaa
cagggaaccataattagagttcatctagttctagaagcaacgaagtcatatagttttaga
agggggacatacccatcaactatattttccttatcctttggaccttcaatgcaacttcca
gatattcttgtagcagcaagttcttcaggttctattcacgtcttctccctgagttttgct
ataaatcagagaagtaggagatcaagtagtctccttgggtcaattttgcctgattctgta
aatgatgcattggatccagctcatcatcatgtgcttcataatgctgttccagcaggagtg
aaaagttatgtggtagtgcgcaaggtggacaaggctgctgacacatcaactgaatttgtt
gcttgtagagccacgctatcaataataacctttaatgggtacttccaggagtatattgta
aatattaacaatcagaatgaatctaaatggactttggagcgtgaatttaatcttttgcca
gcgatatcaggtgaagaacaacactttcagttggtgtga
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integrated database retrieval system
