Manihot esculenta (cassava): 110617895
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Entry
110617895 CDS
T05761
Name
(RefSeq) E3 ubiquitin-protein ligase ATL41
KO
K16282
E3 ubiquitin-protein ligase RHA2 [EC:
2.3.2.27
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mesc04121
]
110617895
Enzymes [BR:
mesc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110617895
Ubiquitin system [BR:
mesc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110617895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-ANAPC11
Prok-RING_1
zf-RING_UBOX
zf-RING_16
FANCL_C
zf-Nse
RINGv
Prok-RING_4
SLX1_C
zf-C3HC4_3
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
110617895
NCBI-ProteinID:
XP_043813710
LinkDB
All DBs
Position
6:21254024..21254443
Genome browser
AA seq
139 aa
AA seq
DB search
MFKNLSLIFTHLKRALNFLFQYPFFHDYPYFKPENSGDHEELSTCQCYKWEPTSAEAIEC
AVCLSKIEEGEEIRESRRCKHMFHRVCLDRWVSYGRMSCPLCRDSLAPRRAIFDHGVEVL
LFKFSSFTSSDDRDTWWLR
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaaaacttgagtttgatctttacccacttgaagcgggcattgaatttcttgttt
cagtatcctttctttcatgactatccttacttcaagccagaaaattcaggcgaccatgaa
gagctaagcacttgccagtgctacaagtgggagccaacatctgcagaagccatagaatgt
gcagtttgtctgagcaagattgaagaaggagaagagattagagaatcaagaagatgtaaa
catatgtttcatagagtttgcttagacagatgggtttcttatgggcgcatgagttgccct
ctttgcagggactcgcttgctcctcgtagagcaatctttgatcatggagttgaagtttta
ttgttcaagttttcttctttcacttcttctgatgatcgtgatacctggtggctcagatag
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