Manihot esculenta (cassava): 110617942
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Entry
110617942 CDS
T05761
Name
(RefSeq) RNA pseudouridine synthase 7
KO
K15454
tRNA pseudouridine32 synthase [EC:
5.4.99.28
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mesc03016
]
110617942
Enzymes [BR:
mesc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
110617942
Transfer RNA biogenesis [BR:
mesc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
110617942
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-GeneID:
110617942
NCBI-ProteinID:
XP_043813134
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Position
6:25334619..25340819
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AA seq
384 aa
AA seq
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MKRKREEENKKEMEIVWQTPANPPEKHDYIFLNGRRHVRPYYFEFISHVKNRWAGKTIVD
LFAEEFKGRPYDYYVTAVKCGRIQVDGEMVPVSYIVKPSQKISHFLHRHEPPVMAWDVSV
LQKDPDVVTICKPASVPVHPCGQYRKNTVVGILQAEHGLSPLFPVHRLDRLVSGLLILAR
NALKADLFRQEIEAGMVQKQYIAKVIGIFPEDEQVVDVNINYNAREGRSTAEVGDSCSDS
PAKGKAACTKFTRISTNGTHSIVLCKPITGRTHQIRVHLQYTGHPIANDFLYLSEHAANR
CAGGMSADRAARSSSFCLTPEDCSDKCEENTREDFSIDPMCTNCPNLAPKGYDVYEEGLW
LHCVKYSGPGWIYECPYPDWAFLT
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaaagagggaagaagaaaacaaaaaggagatggagatagtgtggcaaacgcca
gccaacccaccagagaaacacgattacatctttctcaatgggaggcggcacgtgagacct
tactacttcgagttcatctctcatgttaagaatcgttgggcgggaaagaccattgtcgat
ttgtttgctgaagaattcaagggccgaccttatgattactatgttactgctgtcaaatgc
ggacggatacaagttgatggagaaatggtgcccgtttcctacatagttaaaccctcacaa
aagataagccacttcttacacaggcatgaaccaccagtgatggcttgggatgtttctgtt
cttcaaaaagatccagatgttgtgaccatttgcaagccagcatctgttcctgtgcatcct
tgtggtcaatatcgtaagaacactgttgttggcattcttcaggctgaacatggtttatcg
cctctatttccggttcatcgattagatcggcttgtctcaggactccttatattggctaga
aatgctttgaaggctgacctctttaggcaagagattgaagctgggatggtgcaaaaacag
tatattgcaaaagtcattggaatatttccagaggatgagcaagttgttgatgttaacata
aattataatgctcgagaaggaaggagcacagcggaggttggtgactcttgcagtgattct
cccgccaaggggaaggctgcttgtaccaagtttaccaggatcagtaccaatggaactcac
agcattgttttgtgtaaaccaatcactggccgaactcatcaaatacgtgtgcatttgcag
tatacaggacatcccatagccaatgactttctttacctctctgaacatgctgccaatcgt
tgtgctggaggaatgagtgctgatagagctgctcgcagttcaagcttttgtctaacaccc
gaagattgttctgataaatgtgaagagaatacgagagaagatttcagcattgatccaatg
tgcactaactgtccaaatttggctcctaaagggtatgatgtgtatgaagagggtttatgg
cttcattgtgtgaaatactctggacctggatggatttatgaatgtccatatccggattgg
gcatttcttacctaa
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