Manihot esculenta (cassava): 110617960
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Entry
110617960 CDS
T05761
Name
(RefSeq) two-component response regulator ARR12
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
110617960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mesc03000
]
110617960
Transcription factors [BR:
mesc03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
110617960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
110617960
NCBI-ProteinID:
XP_021616646
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Position
6:27086142..27090671
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AA seq
738 aa
AA seq
DB search
MSNGREASTQSLNKNTCLFKIKILIVDDDSTSLAIVSSMLKSCSLQVVSIKDSLDALATL
RSANGEFDLLITDLHMPGMNGLELQKHVKQEFNIPVIIMSADDKESAILKSIESGAAFYI
VKPVNQDDLRNIWQYAMASKKGKEVVVCENAQEETSSNEKLIVCEEAASSSSANEEGSQK
KRRGRKREREEEQQEEDGPAPAKKAKVVWTNTLHNRFLQAVSHIGLEKAVPKKILEFMNV
PGLTRENVASHLQKYRMFLKKVAEKGFSTSRNLSEKVLRSSFAYGHATSMLQNSRQEHSS
ILRQQPFTRSSFQPGYGASVHGIGSSSFGLSRFHNEEASSSNSVTQICYGQSSLFCNQAS
TRQPMFGSPYPLHQANLSTFNNIGINLSSNTATSYGLTSATNPMQMNPQQNQSNLQNHAS
PSKFGLFRFGCSSYSSGTCSMGTINGSYPRLNQNSTYAGIRLTSDGELIGNGQKRFNGNE
LLSGCNNSGNGLVNWTRNNNGNNAPPRNGEFGFSDGQVTCFSSTGFGSESQCSPTLSPAN
PENTSVVTPLSQQNFITGLGNALGENDINALNNLMNNASNLGSISDNNQHEVGEGGLGEL
LFGTSCTNPCQEERNAEEFLNVNLLSSQYHAEVCYPVNELLNKEFSSACTIADTTSWTEQ
QSSVQPQRMEETVNPNNVGNVNPADVYYPVFEQPQSNNVKAVNNSELNGVHLDEAPISGN
EGWGEDFLNFLLGNDPYW
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatgggagagaagcatcaactcaatctctcaacaaaaacacttgtcttttcaaa
atcaaaattttgattgtagatgatgactctacatctcttgctattgtctcttccatgctt
aaatcatgcagtctccaagttgttagtattaaggattcattagacgctttagcaactctt
cgaagtgcaaatggagaatttgacttgctcatcactgatcttcatatgcctggaatgaat
ggattggaactacaaaagcatgtcaaacaagaattcaacattcctgttattataatgtca
gctgatgacaaagaaagtgcaattttgaagagtatagagagtggagctgctttctatata
gtgaaaccagtgaatcaagatgatctaagaaacatttggcagtatgcaatggcttccaag
aaaggcaaagaggttgttgtttgtgaaaatgcccaagaggaaacttcatcgaatgagaaa
cttattgtttgtgaggaagctgcttcttcttcatcggcgaacgaagagggtagccagaaa
aagagaagggggaggaaaagggaaagagaggaggaacagcaggaagaagatggtcctgct
cctgccaaaaaggccaaggtggtttggacaaatacattgcataatcgattcttgcaggct
gtaagccatataggcttggaaaaggctgttccaaagaaaattcttgaattcatgaacgtg
ccagggctaaccagggaaaatgttgctagccatttacagaaatacaggatgttcctgaag
aaggttgcagagaagggtttttcgacatcacgtaatttgtcggaaaaggtccttaggtcg
tcttttgcctatggccacgccacctcgatgctccaaaattcccgacaggaacattcatcg
attcttagacaacagcctttcacgagatcatcatttcaacctggttatggagcgagtgtc
catggtattggtagctccagctttggcctttctcgctttcataacgaggaagcttcaagt
agcaactctgtaactcaaatctgctatggacagtccagtttattttgcaatcaagctagt
accaggcaaccaatgtttggcagcccatatcctcttcatcaggctaatctctcgacgttt
aacaatattggaattaatctgtcctcaaatacagctacttcatatggtctcactagcgct
acaaatccaatgcaaatgaacccgcaacaaaatcaatcaaatcttcagaaccatgctagc
ccttctaaatttggcttatttagatttggctgctccagctattcttcaggtacttgcagt
atgggaacaattaatggttcctatcctcgtctaaatcagaacagtacttatgctggaatc
cgattgactagcgatggcgagctcattggaaatggacaaaagcgattcaacgggaatgag
ttattaagtggctgtaataatagtggtaatggattggtcaactggactcggaataacaat
gggaacaatgcaccgccgaggaatggggaatttggtttttcggatggtcaagtgacctgc
ttttcttctactgggtttgggagtgaaagccaatgttcaccaacattatctccggctaat
ccagagaacacttcagtggtaacaccactttctcagcaaaatttcattactggtcttggg
aatgctctcggagaaaatgacattaatgctctcaataacctgatgaataatgcctctaac
ttgggtagcatttctgataataatcagcatgaggttggggaaggtggtctcggagaactc
ctttttgggacaagctgtacaaatccttgccaggaagaacgaaacgcggaagagttcttg
aatgttaacctacttagcagccagtatcatgctgaagtgtgctatcctgtgaatgagctc
ttaaataaggaattttctagcgcatgtactattgcagacacaacttcttggactgaacaa
caatcttctgtccagcctcaacgcatggaagaaacagtgaatcccaacaatgtcggcaat
gttaatccagcagatgtctattatccagtctttgagcagccacagagcaataacgtgaag
gctgtgaataattctgagctgaatggcgtgcatctcgatgaagcaccaatatcaggaaac
gagggatggggggaggatttcttgaacttcctgcttggaaatgacccctactggtga
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