Manihot esculenta (cassava): 110617965
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Entry
110617965 CDS
T05761
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mesc03021
]
110617965
Transcription machinery [BR:
mesc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
110617965
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
GerE
DTHCT
Motif
Other DBs
NCBI-GeneID:
110617965
NCBI-ProteinID:
XP_021616651
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Position
6:28334727..28338398
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AA seq
501 aa
AA seq
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MGVVTASSSAAQTTLGFSTKLSKYKSTLKRPLIVAFKDDKPNNTALVAPREQIPLPVETT
KGKKRRGKTNNELSSSTLEMDYNEAAAKLENLYKLSPTTDNSDVDVNGLIGKGQRRKRKT
GEGVKQSENRTSKVIVKNPAKKTKRLSLDERIAMRKNTIEEVVTPIRRKTGAQNEDEKID
ELVRDYSASTDLVSLDWKKMKIPPVLSSTEHAWLFKLMQPMKALLQVKDKLQKKLGREPN
EGELAEATNMNVEEARKQIEVGQAARNKLIKHNLRLILFVINKYFQDFANGPRFQDLCQA
GVKGLITAIDRFEPKRRFRLSTYSLFWIRHAIIRSMTLSSFTRVSFGLESVRLEIQKAKL
ELMVKLQREPTEEEIIERVGISPERYHEVKRASKSVLSLHSRHAVTQEEFINGITDVDGG
DNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKYE
VKALMKLKHPARVDYLRRYVV
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtaactgcttctagctcagctgctcagacaacactaggattcagcacaaaa
ctttcaaagtacaaatccacattaaaaagaccattgattgtggcttttaaagatgataaa
cccaataacacagctttggttgcacctcgtgagcaaatcccattgcctgtagagaccacc
aaagggaagaagagacgaggaaaaactaacaatgaattgtcgtcaagcaccttggaaatg
gattacaatgaagctgccgctaagcttgagaacttatacaagcttagccctacaactgat
aattctgatgtagatgtaaatggcttgatcgggaaaggtcagagaaggaaaaggaaaact
ggtgaaggtgtcaagcaatcagagaatagaactagtaaagttattgttaagaaccctgca
aagaaaactaaacgattgagccttgatgaaagaattgcaatgaggaagaataccatagag
gaagtggttactccaattaggaggaaaactggtgctcagaatgaagatgaaaagattgat
gaacttgtgagagactattctgcttcaactgatttggtcagcttggattggaaaaaaatg
aagatacctccagttctttcttcaacagaacatgcctggttgttcaagttgatgcaacca
atgaaggcgctccttcaagtgaaagacaaattgcagaaaaaattgggtagagaaccaaat
gaaggtgaactagctgaggcaacaaatatgaatgtagaggaagcaagaaaacagatagaa
gttggtcaagctgcaagaaacaagctaattaagcacaatctccggcttatattgtttgta
atcaataaatattttcaagattttgcaaatggcccgagattccaagacctttgtcaagca
ggagttaagggacttattacagctattgatcgctttgaacccaagaggagatttcggctc
tccacatatagtcttttttggattagacatgccataatacgttcaatgacactttcaagc
tttacacgtgtctcatttggccttgaatcagtcagattagagatccagaaagccaaactg
gagttgatggttaagcttcaaagagagccaacagaggaagagattatagagagagtgggg
atctctcctgagagatatcacgaagtaaagagggcttcaaaatccgttttatctttacat
tcaaggcatgcagttacgcaggaagagttcattaatgggatcactgacgttgatggaggt
gataaccggaggcagccagctcttctaaggcttgctctagatgatgtgcttgattctcta
aaacctaaggagagcctagtgatcagacaaagatatgggctagatggtaaaggtgataga
acgttaggagagattgctggaaacttaaacatctccagagaaatggttaggaagtatgaa
gttaaggcgctcatgaagctcaagcacccagctagagtggattatcttcgccgttatgtt
gtttga
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