Manihot esculenta (cassava): 110617994
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Entry
110617994 CDS
T05761
Name
(RefSeq) RNA-binding protein Y14
KO
K12876
RNA-binding protein 8A
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03013
Nucleocytoplasmic transport
mesc03015
mRNA surveillance pathway
mesc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110617994
09122 Translation
03013 Nucleocytoplasmic transport
110617994
03015 mRNA surveillance pathway
110617994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesc03019
]
110617994
03041 Spliceosome [BR:
mesc03041
]
110617994
Messenger RNA biogenesis [BR:
mesc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110617994
Spliceosome [BR:
mesc03041
]
Complex C
Other components
EJC/TREX
110617994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
110617994
NCBI-ProteinID:
XP_021616677
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All DBs
Position
6:28961153..28966089
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AA seq
198 aa
AA seq
DB search
MANADAEAVDFEPEEDDLMDEDGAVDVDNSPRAPLPKLKSAITGGASSSLSAPRKTKGRG
FRDEADADRQSRLASRDFDSLGSDGGPGPQRSIEGWIILVSGVHEEAQEDDLQNAFGDFG
EIKNLHLNLDRRTGFVKGYALIEFEKFEEAQNAIAAMHGAELLTQIINVDWAFCNGPIRR
KNMRSGRAHRSRSPRRRY
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atggctaacgcagatgcggaagcggtggacttcgagccggaggaggacgatctgatggac
gaggacggagccgtcgacgtcgacaactcacctcgggcaccgcttccgaagctgaagtct
gcaattactggaggtgcatcttcctccctctcagctcccagaaagactaaaggccgtggc
ttcagagatgaggctgatgcagaccgccagagccgccttgcctctcgcgacttcgattcc
ctcggctccgatggtgggcctggccctcagcgatctattgaaggatggattattttggta
agtggagtgcatgaggaggcacaggaggatgatttgcaaaatgcttttggtgattttggt
gagataaaaaatttgcatttgaatcttgatcggcgaactgggtttgttaagggttatgca
ctgatagaatttgaaaagtttgaggaagcacagaatgcaatagctgcaatgcatggagct
gaacttctgacccagatcatcaatgtggattgggccttctgcaatgggcctatcagaaga
aagaacatgagatcaggacgagcacacaggtcaaggagtcctaggaggagatattaa
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integrated database retrieval system