KEGG   Manihot esculenta (cassava): 110617994
Entry
110617994         CDS       T05761                                 
Name
(RefSeq) RNA-binding protein Y14
  KO
K12876  RNA-binding protein 8A
Organism
mesc  Manihot esculenta (cassava)
Pathway
mesc03013  Nucleocytoplasmic transport
mesc03015  mRNA surveillance pathway
mesc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110617994
  09122 Translation
   03013 Nucleocytoplasmic transport
    110617994
   03015 mRNA surveillance pathway
    110617994
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mesc03019]
    110617994
   03041 Spliceosome [BR:mesc03041]
    110617994
Messenger RNA biogenesis [BR:mesc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     110617994
Spliceosome [BR:mesc03041]
 Complex C
  Other components
   EJC/TREX
    110617994
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5
Other DBs
NCBI-GeneID: 110617994
NCBI-ProteinID: XP_021616677
LinkDB
Position
6:28961153..28966089
AA seq 198 aa
MANADAEAVDFEPEEDDLMDEDGAVDVDNSPRAPLPKLKSAITGGASSSLSAPRKTKGRG
FRDEADADRQSRLASRDFDSLGSDGGPGPQRSIEGWIILVSGVHEEAQEDDLQNAFGDFG
EIKNLHLNLDRRTGFVKGYALIEFEKFEEAQNAIAAMHGAELLTQIINVDWAFCNGPIRR
KNMRSGRAHRSRSPRRRY
NT seq 597 nt   +upstreamnt  +downstreamnt
atggctaacgcagatgcggaagcggtggacttcgagccggaggaggacgatctgatggac
gaggacggagccgtcgacgtcgacaactcacctcgggcaccgcttccgaagctgaagtct
gcaattactggaggtgcatcttcctccctctcagctcccagaaagactaaaggccgtggc
ttcagagatgaggctgatgcagaccgccagagccgccttgcctctcgcgacttcgattcc
ctcggctccgatggtgggcctggccctcagcgatctattgaaggatggattattttggta
agtggagtgcatgaggaggcacaggaggatgatttgcaaaatgcttttggtgattttggt
gagataaaaaatttgcatttgaatcttgatcggcgaactgggtttgttaagggttatgca
ctgatagaatttgaaaagtttgaggaagcacagaatgcaatagctgcaatgcatggagct
gaacttctgacccagatcatcaatgtggattgggccttctgcaatgggcctatcagaaga
aagaacatgagatcaggacgagcacacaggtcaaggagtcctaggaggagatattaa

DBGET integrated database retrieval system