KEGG   Manihot esculenta (cassava): 110618022
Entry
110618022         CDS       T05761                                 
Name
(RefSeq) glycine-rich RNA-binding protein 2, mitochondrial isoform X1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
mesc  Manihot esculenta (cassava)
Pathway
mesc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110618022
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mesc03019]
    110618022
   03041 Spliceosome [BR:mesc03041]
    110618022
Messenger RNA biogenesis [BR:mesc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     110618022
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     110618022
Spliceosome [BR:mesc03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    110618022
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 110618022
NCBI-ProteinID: XP_021616716
LinkDB
Position
6:21995387..21997941
AA seq 294 aa
MAFLSKVGNVLRQAGSKQINGELSASRPSLYQAIRCMSSSKLFIGGISYATDDTSLREAF
SKYGEVIEARVILDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVKVNYANDRA
RGSFGGGGYGAGGGGYGAGGGGYGAGGGSYGAGGGGYGTGSRGYNNNYGGSYGGPGENYG
AGNTDSGRYAGRNVGYSGGSTFDGSSTGAYGSDTWNYGGSDGNVGGGNDKLDSSNIGGGY
DGNATSGFSGGNDQFGGHESSGLDNAAGKYDQDEALDGNFRDDDDNAGDFAKRA
NT seq 885 nt   +upstreamnt  +downstreamnt
atggcgtttcttagtaaagttgggaatgtactgaggcaggcaggcagcaagcagatcaat
ggtgaactatctgcatccaggccatccctctatcaagcaataagatgcatgtcatcttca
aaactttttattggaggtatttcttatgctacagatgacactagtctaagagaagctttt
agcaaatacggcgaggttattgaagcaagagtcattctggatcgtgaaactggtagatct
agaggatttggttttgtaacttacacatccagtgaggaggcctctagcgccatccaggcc
ttggatggacaggatcttcatggtcgtcgtgtaaaggtgaattatgcaaatgatagagct
cgcggtagctttggaggtgggggctatggtgctggaggtgggggctatggtgctggaggt
ggaggctatggtgctggagggggcagttatggtgctggaggaggcggctatggcactggc
agtcgaggctataacaataattatggaggtagttatggtggtcctggtgagaattatgga
gctggtaacactgacagtggccgctatgcaggtcgaaatgttggctattctggtggaagc
acttttgatggtagtagcactggggcgtatggcagtgatacttggaattatggtggtagt
gatggtaatgttggtggtggcaatgataaacttgatagcagcaatattggaggtggttat
gatggaaatgccacttcaggattcagtggtggcaatgatcaatttggtggccatgaaagc
agcggcttggataatgcagctggaaaatatgatcaagatgaagcattggacggaaatttc
agggacgatgatgataatgctggtgactttgccaaaagggcgtga

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