Manihot esculenta (cassava): 110618025
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Entry
110618025 CDS
T05761
Name
(RefSeq) RING-H2 finger protein ATL79 isoform X1
KO
K19040
E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:
2.3.2.27
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mesc04121
]
110618025
Enzymes [BR:
mesc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110618025
Ubiquitin system [BR:
mesc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
110618025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-ANAPC11
zf-C3HC4
zf-RING_UBOX
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
110618025
NCBI-ProteinID:
XP_021616732
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Position
1:complement(1384579..1386496)
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AA seq
213 aa
AA seq
DB search
MRPQPEMTTAASPHIIHLSPPLPHTTSTACSPHAHSCRWWPYSNSNDFGANTAMILIILL
CALICALALNTAIRCFLNGGHHPPDRLPQNRREIEEQRKPNTEAGAAPLVVAPTLVYSAG
MKLGGEEADCAICLSEFMEGDGIRVLGTCKHGFHVHCIERWLSCHFSCPTCRRSCLASVP
SSSETSETPRNDLNNPSQQPETPMATGQFTSTP
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgcggccgcaaccagaaatgacaacggccgcttctccacatatcatccacctctctcca
ccgcttccccacacaacatcgacggcatgttccccccacgctcacagctgcaggtggtgg
ccttactcaaactctaatgattttggagccaacacagccatgatcctcatcatcctcctc
tgtgcactaatatgtgctcttgctctcaacacagctatccgctgcttcttaaacggcggc
catcacccaccagaccgtcttccccaaaatcgacgagaaattgaggaacagcgaaaaccc
aacactgaagcaggtgcagcgccattggtggtggctccaacgctggtgtattcggcaggg
atgaagctgggaggagaagaggctgactgcgctatttgcttgtcggagttcatggagggt
gatgggattcgggttttgggaacttgcaagcatgggttccatgtccactgtatcgaacgg
tggttgtcttgccacttctcttgtcccacttgtcgccgcagttgtcttgcttccgtcccc
tcctcctcagaaacttccgagacaccaagaaatgacctaaacaacccttcccaacaaccg
gagaccccgatggctacaggtcaattcactagtactccttaa
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