Manihot esculenta (cassava): 110618051
Help
Entry
110618051 CDS
T05761
Name
(RefSeq) WD repeat-containing protein 76
KO
K24755
WD repeat-containing protein 76
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mesc04121
]
110618051
03036 Chromosome and associated proteins [BR:
mesc03036
]
110618051
03400 DNA repair and recombination proteins [BR:
mesc03400
]
110618051
Ubiquitin system [BR:
mesc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
110618051
Chromosome and associated proteins [BR:
mesc03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
110618051
DNA repair and recombination proteins [BR:
mesc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
110618051
DSBR (double strand breaks repair)
Other DSBR factors
Others
110618051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
WDR55
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
110618051
NCBI-ProteinID:
XP_021616762
LinkDB
All DBs
Position
6:11953578..11957340
Genome browser
AA seq
511 aa
AA seq
DB search
MAPSKLTEYEKKRLENIRRNDEMMAALKIHSTASQLSAATKRQRVGASKSYKLSPEKKKA
KSESPIVIRRSLRTRGMPPDSGGLDGFSVETPDRTPKSISPQKPSPRVMGPLSTRDAYSG
EGSDRALIDTILSLEKKPQLGVPIKKELDRGEVVKMEQSDGILHDSVKGVVKDLHLDCDI
KIEKKETESCVDFWSMNLKTENIARLVPGRIMAVRFFPCNDVRMVVAGNKFGNVAFWNMD
SKGEEGDGIFLYHHHTGPISGILFQQSCLSKIYTSCYDGFLRLMNAEKEVFDLVYSSDDA
IFSLSQQPNNVHSLYFGEGRGGGLNSWDERTGRFSSQWILHADRINSIDFNSQNPNIMAT
SSTDGTACLWDLRSVNADKPKSLKILNHNRAVHSAYFSPSGSFLATTSADNSVGVLGGVN
FEDSSMIYHNNQTGRWLSSFRGIWGWDDSSIFIGNMKRGVDVISPSQRRTILTLQSPDMS
AIPCRFDAHPCKVGMLAGATSGGQVYVWTSS
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggcgccttcaaaactaacggaatacgagaagaagcgactcgaaaacattcgtaggaat
gacgaaatgatggccgccctcaagattcactccaccgcctctcaactctctgccgctacc
aaacgccaaagagttggagcatccaaatcctataaattgagcccagagaagaaaaaagcc
aaatccgagtctccgattgttattcggcggtcgctacgtacaagaggaatgccgcctgat
tcaggaggtttagatgggttttctgttgagacccccgatagaactcccaagtcaatcagt
ccacaaaagccttcgccgcgtgttatgggaccgcttagtacgagggatgcctacagcgga
gaaggttctgatcgagctctaatagacacgattctgtctcttgaaaagaaaccccagttg
ggtgttccaattaaaaaggaacttgatagaggtgaggttgtaaagatggagcaaagtgat
ggaattttgcatgattcggttaagggtgtggttaaagatttgcatttggactgtgatatt
aagatagagaaaaaggaaactgagagttgtgttgatttctggtcaatgaacttgaaaacg
gagaatattgcaagacttgtgccagggaggataatggcagtgagattttttccttgcaat
gatgtgaggatggttgtggcagggaacaaattcggtaacgttgctttttggaatatggat
agtaaaggggaggaaggggatgggatatttttgtatcaccaccacactgggcccatttca
gggattttgtttcagcaatcttgtttgtccaagatctacaccagctgctatgatggcttt
cttcggttgatgaatgctgagaaggaagtatttgatctggtatactccagtgatgatgct
atattttcactctcccaacaaccaaataatgtgcatagcttatattttggtgaaggtcgt
ggtggaggattgaatagctgggatgagaggacaggaagattttcttcccagtggattctg
catgcagacagaatcaattccatagatttcaattctcagaaccctaacattatggccact
agttccacggatgggactgcttgtctctgggatttgagaagtgtgaatgcagataaaccc
aaaagtttgaagatactaaaccataatagggctgtgcattctgcttacttctcaccttct
ggaagcttcctagcaacaacaagcgctgacaactctgttggtgtactaggtggtgttaat
tttgaggattcttctatgatataccataataatcaaacaggcagatggctttcttctttc
agaggaatatggggttgggatgattcatctatcttcattggcaatatgaaacgaggagta
gatgttatctctccctcacaaagaagaacaattttaactctacagagtccagacatgtct
gctattccatgcagatttgacgcacacccttgcaaggttggaatgttagcaggagcaacc
agtggaggccaggtttacgtctggacttcaagctag
DBGET
integrated database retrieval system
