Manihot esculenta (cassava): 110618091
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Entry
110618091 CDS
T05761
Name
(RefSeq) pachytene checkpoint protein 2 homolog isoform X1
KO
K22399
pachytene checkpoint protein 2
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mesc03036
]
110618091
Chromosome and associated proteins [BR:
mesc03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
110618091
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
TRIP13_N
AAA
AAA_16
AAA_22
AAA_18
nSTAND3
AAA_14
AAA_24
ATPase_2
AAA_5
NACHT
DUF815
AAA_28
KAP_NTPase
NPHP3_N
AAA_2
RNA_helicase
Cytidylate_kin
TIP49
RuvB_N
ABC_tran
AAA_30
AAA_25
AAA_13
TsaE
Viral_helicase1
AAA_17
AAA_7
Rad17
SLFN-g3_helicase
ATPase
nSTAND1
AAA_11
bpMoxR
AAA_19
AAA_33
PduV-EutP
IstB_IS21
Mg_chelatase
AAA_3
MMR_HSR1
Parvo_NS1
SRPRB
NB-ARC
Bac_DnaA
Sigma54_activat
PhoH
Motif
Other DBs
NCBI-GeneID:
110618091
NCBI-ProteinID:
XP_021616822
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All DBs
Position
6:24254110..24259379
Genome browser
AA seq
457 aa
AA seq
DB search
MTTPMEITTQNPTETHFSEQNGVAQAQLPDSSSILGQDKFLVSVEVCLKPSSTARVEDVR
CAVERMLEKRSLSYVDGPIPVPADDPFLAQNVQRICICDTDEWAKKHEILLFWQVKPVVH
VFQLSEEGPCEELSGDGQLSTFNEWILPAKEFDGMWESLIYESGLKKRLLRYAASALLFT
EKGVNPFLVSWNRIVLLYGPPGTGKTSLCKALAQKLSIRFNSRYPQCQLVEVNAHSLFSK
WFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNAL
LTQLDKLKCSPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLEARYEILRSCLQELIR
TGIISNFQDFDNLVLPNYSTLKEKLNAADIQEGQAPVDLYKQLLEAAQACEGLSGRSLRK
LPFLAHAALSNPCGCHANKFLSAMIDTATRERSELLD
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgactactcccatggagatcactacgcaaaatcccacagagacccacttctccgagcaa
aacggcgttgcacaagcacagctacctgactcttcttccattctcggccaggacaaattt
ctcgtttctgttgaagtttgcttaaaaccctcgagcacagctcgagttgaagatgtccgc
tgcgccgttgaaagaatgcttgaaaagaggagtttaagctatgttgatggaccgattcca
gtgcctgccgatgatccctttcttgcacaaaacgtacaaagaatatgtatttgtgacacg
gatgaatgggcaaagaaacatgagattcttttgttttggcaggtcaaaccagttgtacat
gtctttcagcttagtgaggaaggaccatgtgaggaattaagtggggatggtcaactttct
accttcaatgaatggattcttcctgcaaaggaatttgatggcatgtgggaaagcctaatt
tatgagtctggtctcaagaaaaggttgttgcgttatgcagcgagtgcactactcttcaca
gagaagggtgttaaccctttccttgtgtcatggaacagaattgttcttttatatgggcca
ccagggactgggaaaacgtctttatgtaaagcattggctcaaaagctgtcaatacgtttt
aactccagatatcctcagtgccaattggtggaagttaatgcacactctctatttagcaaa
tggttctctgaaagtggcaagttggttgcaaagcttttccagaaaattcaagaaatggtt
gaagaagaaaacaatctggtatttgttttaattgatgaagttgaaagccttgctgctgca
agaaaagctgctttgtctggttctgaaccttctgattctattcgagttgtcaatgcacta
ctaactcagttggacaaattgaaatgctcgccaaatgtgattatcctgactacctctaat
ataactgctgctatagatattgcatttgtggatcgagctgatatcaaagcttatgttggt
cctccaactcttgaagctcgttatgaaattctaaggtcttgcttgcaggaactcatacga
actggaatcatatcaaatttccaggactttgacaacctcgtacttccaaattattcaacc
ttgaaagagaaattgaatgcagctgatattcaagaaggtcaggcgccagtggacttatat
aaacaattgcttgaagctgcacaggcatgcgagggactaagtggaagatcattaagaaaa
ctcccatttttggcacatgcagctctttcaaacccatgtggctgtcacgcaaataagttc
ttgtcagcaatgatagacacagcaacgagggagcgttctgagctgctcgattga
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