Manihot esculenta (cassava): 110618133
Help
Entry
110618133 CDS
T05761
Name
(RefSeq) general transcription factor 3C polypeptide 3 isoform X1
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mesc03021
]
110618133
Transcription machinery [BR:
mesc03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
110618133
TFIIIC, fungi type
110618133
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_14
TPR_19
TPR_2
TPR_9
TPR_1
TPR_8
TPR_16
TPR_7
TPR_11
TPR_12
TPR_CcmH_CycH
ANAPC3
NatA_aux_su
TPR-S
TPR_15
RPN7
ARM_TT21_5th
ARM_TT21_4th
TPR_21
BSP_II
NatB_MDM20
Motif
Other DBs
NCBI-GeneID:
110618133
NCBI-ProteinID:
XP_021616888
LinkDB
All DBs
Position
6:complement(2707784..2732888)
Genome browser
AA seq
926 aa
AA seq
DB search
MTGNKGNDMSDFDGFALDMSSEEEEEEEVVVVEEDEDEDEDEDEGDDGEFEEQEKEAISL
GRIEGDGAADGSGIQFYQQFDHVEYEALAAKKRKGLGDSKGAGSHKKARQEDLSGASIDE
IMEAMNYGIRRKSRKLKKRGRRKGSKNKLSPEITKMLGDATVLYAHGRYEDAISVLNEVV
RLAPHVPDSYHTLGLVHIALGNTEKAMGFYTIAARLMPKDSPLWRVLFDWHNERGDVARA
RLCLSKAIRADPNDIALRVLHASLYAKLGDCQRAAESYEQISRVCPEDVEVLKISAKLYA
ECGQTERSISILENHLKSHPSGADFGVIDLLAAILMETNAYNNALQHIEHAHQVYYSGKE
LPLELKIKAGICHVRLGNIEKAEIMFSDIETESDSSHAGLIMDVADAFMSLGHFESALKY
YHMLESNAGIENEGYVHLKVGQCYISLEDRVKAVMFFYKALHALEDSVDCRLALASLVLE
DGKEDEAISLLSPPENLDSVNLSSDKQKAWWLDGKIKLKLCQIYRAKGMLEDFVNTIFPL
VRESLYVKTLRQKVKKRLTISVLRQRTKILDVGETVDVFGGVRPLASRSDLLKASRARKL
LQKKEEQKAVERAAGIDWHSDDSDDESLEEEIRVPPLPNFLKDEEHHNLIIDLCKALQSL
ERYWEALEIINLTRKLVYKKLPVEKKEELQSIAAQISYRTTDPKHGFDCVKSIVLQHPDS
HAAWNCYYKIALRLGKNYSKHAKFLRHMRTKHDDCVPPIVIYGHQFTMASHYQDAVREYL
AAYKLLPENPLVNLCVGTAFINLALGFRLQNKHQCVAQGLSFLYNNLRLAENSQVSLQEA
FYNIACAFHHVGLVSLAASYYEKVLETRERDYPIPKLLNENSDPPENLNPGYCDLRREAA
YNLHLIYKRSGAFDLARQVLKDHCTY
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgacaggaaacaagggaaatgacatgagtgactttgatggatttgccttggatatgagt
agtgaggaggaggaggaggaggaggtggtggtggtggaggaggatgaggatgaggatgag
gatgaagatgagggtgatgatggtgaatttgaagagcaggagaaagaagcaatttcactt
ggtagaattgaaggtgatggtgctgctgatggttcaggaattcaattttatcaacaattt
gatcatgttgaatatgaagctcttgctgcaaaaaagcgtaaaggacttggtgatagtaag
ggtgcagggtctcataagaaggctaggcaagaggatttatctggagctagcatagatgaa
ataatggaagccatgaattacggtattcggagaaagtcgcgaaagcttaagaaaagaggt
aggaggaagggatcaaagaataagctcagccctgaaatcacaaagatgctgggtgatgct
actgtgctctatgcacatggccgctatgaagatgccatatctgttctgaatgaagttgtt
aggttggcacctcatgtgcctgattcataccatacacttggacttgtccatattgcactt
ggtaatactgaaaaagcaatgggattttatacaattgcagcacgccttatgccaaaagat
tcacccttgtggagagttctttttgactggcacaatgaacgaggagatgtagctagagcg
aggttgtgcctttctaaagcaataagggcagaccctaatgacattgcactcagagttctt
catgcatccctctatgctaagcttggagattgccaaagagctgctgagtcttatgaacaa
atatcacgagtttgtcctgaagatgttgaagtgctgaagatatctgctaagttgtatgct
gaatgtggtcagacagaacgaagtatcagcattttggagaaccatctcaagagtcatcct
tctggagctgactttggtgtcatcgatttgcttgccgccatactcatggaaactaatgca
tataataatgctcttcaacatattgagcatgctcaccaggtttactattcaggaaaggaa
ctgcctctggaattgaaaattaaagcaggaatctgccatgttcgtcttggtaatattgag
aaggcagagattatgttcagtgacattgaaacagagagtgactctagtcatgctgggttg
attatggacgtagctgatgcatttatgagtcttgggcattttgaatctgcattgaaatat
tatcatatgctggagtcaaatgctgggatagaaaatgagggctatgtacatttgaaagtt
ggtcagtgttacatatccttggaagatagagttaaagcagttatgttcttttataaagct
ttgcatgcacttgaagatagtgttgattgtcgattggcgttggcatcacttgtgcttgaa
gatggtaaagaagatgaagccatttctttgctatcacctccagaaaatttagattctgtc
aacttaagttctgataagcagaaggcatggtggcttgacgggaaaataaaactgaagctt
tgtcaaatatatagggctaaaggaatgttagaagactttgtcaacacaatattccctttg
gttcgtgagtcactttatgtcaaaaccctccggcagaaggtgaagaagaggctgacaata
agtgttcttcgtcaaagaaccaaaattttggatgttggggaaactgttgatgtatttggt
ggagtcagaccattggcttctcgctcggatctgttgaaagcgtctagagctcggaagttg
cttcagaaaaaggaagaacagaaagctgtggaaagggctgctggtattgattggcatagt
gatgattcagatgatgagtctctggaagaagaaatcagagttcccccccttcctaatttt
ttgaaggatgaagagcatcacaatctgataatagatttgtgcaaggcactgcaatcattg
gaaaggtattgggaagcattagagattattaacctcactcggaaattggtgtacaagaaa
ctgcctgttgagaagaaggaggaactccagtctattgcagctcaaatatcatacaggacc
acagatcctaagcatgggtttgactgtgtaaaatcaattgttctgcagcatcctgacagc
catgctgcctggaactgctattacaaaatagctctgaggttgggaaagaactattcaaag
catgcaaaatttctacgccatatgcgaaccaaacatgatgattgtgtaccgcctatagtc
atatatgggcatcagtttacaatggccagccattaccaagatgctgtaagagaatatctt
gcagcttataaactgttaccagagaatccactagttaatctttgtgtgggaacagcattt
atcaatttagcccttggattcagacttcaaaacaagcatcaatgtgttgcacaaggctta
tcattcctctataacaatttaaggcttgctgaaaacagccaggtatctttacaggaggct
ttctataatattgcctgtgcttttcatcatgttggacttgtctctctagcagcttcatat
tatgaaaaggtgcttgaaacgcgtgaaagggattaccctattccaaaacttctgaatgag
aattcagatcctcccgaaaatctgaatccaggttactgtgacctgcgtagggaggcagct
tataatttgcatttgatatataaaagaagtggagcttttgatcttgctcgccaggttttg
aaagatcactgcacttactga
DBGET
integrated database retrieval system
