Manihot esculenta (cassava): 110618207
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Entry
110618207 CDS
T05761
Name
(RefSeq) VAMP-like protein YKT61 isoform X1
KO
K08516
synaptobrevin homolog YKT6
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
110618207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mesc04131
]
110618207
Membrane trafficking [BR:
mesc04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
110618207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Synaptobrevin
Longin
AcrIIA4
Motif
Other DBs
NCBI-GeneID:
110618207
NCBI-ProteinID:
XP_021617007
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All DBs
Position
6:complement(11923439..11929064)
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AA seq
199 aa
AA seq
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MKITALLVLKCNPEGSDPVILANASDVSHFGYFQRSSVKEFVVFVGRTVAKRTLPGQRQS
VQHEEYKVHSYNSNGLCAVGFMDDHYPVRSAFSLLNQVLDEYRKNFGDSWRALQADNTQP
WPYLDEALTKFQDPAEADKLLKIQRELDETKIILHKTIDSVLARGEKLDSLVEKSSDLSA
ASQMFYKQAKKTNQCCTIL
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcacagcgctcttggtattgaagtgcaatccggagggatcggatccggtaatt
ttagcaaacgcttccgatgtgagtcattttgggtacttccagaggtccagcgtcaaagaa
ttcgttgtttttgtcggccggactgtcgccaaacgtacccttcccggccaacgccagtcc
gtccagcacgaagagtacaaggtgcattcttacaacagcaatggcctgtgtgcagtgggg
tttatggatgatcattatcctgtccgaagtgccttttctcttcttaatcaggtgctagat
gagtaccggaagaattttggtgattcatggagggctttgcaggcagataatactcaaccc
tggccatatttggatgaagcattgaccaagttccaagatcctgcagaggcagacaagttg
ttgaaaattcagagggagttggatgagacaaaaattatccttcataaaactattgacagt
gtactagcacgaggtgagaaactggacagcctagttgagaagagttcagatctgagtgct
gcttcacagatgttctacaagcaggcaaaaaaaaccaatcaatgttgtactatactgtaa
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