KEGG   Manihot esculenta (cassava): 110618323
Entry
110618323         CDS       T05761                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
mesc  Manihot esculenta (cassava)
Pathway
mesc03010  Ribosome
mesc04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    110618323
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    110618323
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:mesc03011]
    110618323
   04121 Ubiquitin system [BR:mesc04121]
    110618323
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mesc04147]
    110618323
Ribosome [BR:mesc03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    110618323
  Archaea
    110618323
Ubiquitin system [BR:mesc04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   110618323
Exosome [BR:mesc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   110618323
  Exosomal proteins of colorectal cancer cells
   110618323
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Plexin_RBD Dsc3_N TBK1_ULD DUF2604 UBL_UBAC1 Fer2_3 Ubiquitin_5 IBR OTU1_UBXL
Other DBs
NCBI-GeneID: 110618323
NCBI-ProteinID: XP_021617180
LinkDB
Position
1:complement(39650781..39651524)
AA seq 156 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLSILQFYKVDDSGKVQRLRKE
CPNADCGAGTFMANHFDRHYCGKCGLTYVYQKAGGD
NT seq 471 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtcaaaaccctaacgggtaagaccataactctagaggtagagtcttcg
gacactatcgacaatgtgaaggccaagatccaagacaaggagggcattccaccggaccag
cagcgcctcatcttcgctggaaaacaactagaagacggccggacccttgccgactacaac
attcagaaggagtcgactcttcatctggtgttgcgcttgaggggcggagccaagaagagg
aagaagaagacctataccaaacccaagaagatcaagcacaagaagaagaaggtcaagctc
tccattcttcagttctacaaggttgatgacagcggtaaggtgcagaggctgaggaaggag
tgccccaacgctgattgtggcgctggtacttttatggctaatcattttgataggcactac
tgtggtaagtgtggtctcacctacgtttaccagaaggcaggcggtgactga

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