Manihot esculenta (cassava): 110618329
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Entry
110618329 CDS
T05761
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 23 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mesc01002
]
110618329
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mesc04121
]
110618329
Enzymes [BR:
mesc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
110618329
Peptidases and inhibitors [BR:
mesc01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
110618329
Ubiquitin system [BR:
mesc04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
110618329
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Peptidase_C98
MAGI_u1
Motif
Other DBs
NCBI-GeneID:
110618329
NCBI-ProteinID:
XP_021617187
LinkDB
All DBs
Position
6:complement(10626955..10637479)
Genome browser
AA seq
937 aa
AA seq
DB search
MENIAISSTELRIQSTEDVSLDVAKGSSVVSSSVLHRRIEFHPARKPFTGLGNSGAGSDF
RIETLNPDSGRHRPPGGSSCQTGKKVDGMDFVENGLDPELSFGITFRKIGAGLQNVGNTC
FLNSVLQCLTYTEPLAAYLQSGKHQNSCHVAGFCALCAIQKHVSRALQSTGRSLVPKDLV
SNLRCISRNFRNARQEDAHEYMVNLLESMHKCCLPSGVPSESPAAYEKSLVHKIFGGRLR
SQVECQQCSYCSNKFDPFLDLSLEIIRADSLPVALRHFTAAELLDGGEKHYQCQRCKQKV
RAKKRLTVHKAPYVLTIHLKRFQAHDPGRKVEKKVLFDRSLDMKPFVSGSYEEDLKYSLY
GVLVHQGHTTHCGHYVCYVRTSSGIWYLLNDMEVRPVSEKTVLDQKAYMLFYVRDRKNII
SRKPVDIVPKENTKATAGSNITNVVLKQLSKECEDNGSVGNRSVAAGSAAAVNRKDPPSF
GASEEILQKEALNRATVSECLVRKSDTDAEPPVSPLPKNLSKGGHPNPDLEHSFPSSAPS
VKRNSNTAKVDNSIVNVKSDCREFSSDSKEPQNSPIEKLVKDEAPEKINHILTEGVDETE
KIQRHSQSVDSSDNALNKIDCGKSPNEPSCKISQAGGFRDKGATFSSPGDDTGDSSERVA
NELVVSSIPSVITKQHQQIKAPDCSSHKKLKRRLLKCGIPNMHLGSKLLRASLGIRKKKK
YKKSKRRSSGIQNLIKKQLLEDNCFSPDDGPSTSKISKPVSLGSTNSQRKRAKSLSNCRV
DSLMDTVDEAFEDSNSQNGIVVSIHKQLKEGSLSISKANQQDTNVPECTEGGKKDAQENG
FMCMLTRGLQENTVAPWEGIELPQSQIVESNTTENLRIGYVPDEWDEEYDRGKKKKLRHN
RHNFGGPNPFQEIASKKTKFKKAKMDQSRSGNKPFRI
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatattgctataagcagcacagagctaaggatccaatcaacggaagatgtgtcg
ttagatgttgcgaagggatcctcagtggtttcttcttctgtgttacacagaaggatcgag
ttccatcctgctagaaaaccgtttactgggttgggaaatagcggtgctggtagcgatttt
cgaattgagactctaaaccctgattctggtcgtcataggcctccgggtgggagctcttgt
cagacagggaagaaagtcgacggaatggatttcgtggagaatgggcttgatccggagctc
agttttgggattactttcaggaaaattggcgctggtttgcaaaatgttggaaacacatgt
tttctcaattcggtgctgcagtgtttaacatatactgagcctttggcagcatacttgcaa
agcggcaaacatcaaaactcatgccatgttgctggtttttgtgcgttgtgtgccatccag
aaacatgttagtcgtgctttacaatcaactgggaggtcactagtacctaaggatcttgta
tcaaacttgcggtgcatatcacggaacttcagaaatgccagacaagaggatgctcatgag
tacatggtaaacttgctggagtcgatgcataaatgctgtttgccttcaggagttcctagt
gaatcacctgctgcttacgaaaagagtttggtgcacaaaatctttggtggtcgcctccgt
agtcaggtggaatgccaacaatgctcgtactgctccaacaagtttgatccatttttagat
ttaagccttgaaattattagggcagattctttgcctgttgcgcttcgacactttactgct
gcagagttgttagatggaggagagaagcattatcaatgccagcgatgcaagcagaaagtt
agagccaagaaacggcttacagtccacaaggctccatatgtgcttaccatccatctaaag
cgctttcaggcacatgatcctggaaggaaagttgagaagaaagtcttatttgaccgttcg
ttggacatgaaaccatttgtcagtggttcctatgaagaagatttgaagtacagtctctac
ggtgtgctggtgcaccagggtcatactactcattgtgggcactatgtttgttatgttcga
acatcaagtggcatatggtatctcttgaatgatatggaggttcgcccagtcagtgagaag
actgttctagaccagaaggcatacatgctcttctatgtccgcgatagaaaaaatatcatt
tcaagaaagcctgttgatatagtgccgaaagaaaatacgaaagcaactgctggcagtaac
attacaaatgtggttctgaagcagttgtcaaaggaatgtgaggataatggttcagttggg
aatcgatcagtggctgcaggctctgctgctgctgttaatagaaaagatccaccaagtttt
ggtgcatcggaagagatccttcagaaagaagcactgaatcgagcaacagtttcagaatgc
ttagtaagaaaatcagatacagatgcagagcctccagtttcacccttacctaaaaacctg
tcaaaaggaggtcatccaaaccctgatctggagcactcttttccatcttcagccccatcc
gtaaagagaaacagcaacactgctaaagttgacaacagtattgtcaatgtcaaaagtgac
tgtagggagttctcttctgatagcaaagagccccaaaattcacctattgaaaagcttgta
aaggatgaggcgccagaaaagatcaatcacatcttaactgagggagttgatgaaacagag
aagatccaaagacattctcaatctgtcgattctagtgacaacgcattgaacaaaatagat
tgtgggaaatcaccaaatgaacctagctgtaaaatcagtcaggctggagggtttcgtgat
aagggtgctactttcagttcacctggtgatgacacaggggatagtagtgaacgagtagca
aatgagttggttgtatcatcaatcccatcagttattacaaagcagcatcaacagattaaa
gctcctgattgctcatctcacaaaaaattaaaaaggaggcttttgaagtgtggaattcca
aatatgcatcttggctcaaaattactcagagcatcattaggcattcggaaaaagaagaaa
tataaaaagagcaagcgccgttcttcagggatccagaatctcattaaaaaacagttgctg
gaggataattgtttttcacctgatgatgggccatctacatcaaagatatccaagccagtt
tcattgggttcaacaaattcacaaagaaagagggctaaatctctttcaaactgcagagtt
gattccctgatggatactgtggatgaagcatttgaggatagtaatagccagaatggcatt
gtagtttcaattcataaacagttaaaagagggctcgctatcaatatctaaagcaaaccag
caggatactaatgttcccgaatgtacagaaggtggcaaaaaagatgcacaagagaatgga
ttcatgtgtatgcttactcgaggtctgcaagagaatactgttgcaccttgggaggggata
gagttgcctcaatcacagattgtggaatcaaatactacagaaaatctccgaattggttat
gtgccagatgagtgggatgaagaatatgatcgaggtaagaaaaagaagttgaggcacaat
aggcacaactttggtgggccaaatcctttccaagaaattgccagcaaaaaaacaaaattt
aaaaaggcaaagatggaccaatctagatctggaaacaaaccattcaggatatga
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