Manihot esculenta (cassava): 110618420
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Entry
110618420 CDS
T05761
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00040
Pentose and glucuronate interconversions
mesc01100
Metabolic pathways
Module
mesc_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110618420
Enzymes [BR:
mesc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
110618420
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Nab2-zf4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
110618420
NCBI-ProteinID:
XP_021617242
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Position
7:complement(22087365..22088822)
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AA seq
392 aa
AA seq
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MGRQHSFPFLVAILTYLFTSSLSNAAHYNVLYYGAKPDGRTDSTKAFLAAWIQACGSVTP
ATVYVPAGRFFLRNIVFQGPCKNGAILFRIVGTLVAPSDYRVIGNAGNWLLFQFVNGVTV
YGGVLDGQGPALWACKASGRNCPTGATSLAFSNSNNIAISRLISLNSQMFHIVINGCHNV
KVQGVTVSASGNSPNTDGIHVQLSSSVAILNSWIGTGDDCISIGAGTSNMWIERVACGPG
HGISIGSLGKELQEPGVENVIVKSVVFTGTQNGLRIKSWARPSNGFVRNIRFQDAVMKNV
QNPIIIDQNYCPNNINCPNQGSGIKVSDVAYHGIWGSSATPVAVKFDCSRKSPCTGIYLG
DVNLTYRNQPSEASCKNADGVAIGFVQPSSCL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgggcagacaacatagctttcctttccttgttgcaattctcacctatctctttacttca
tctttatcaaatgcagcacattataatgtcctatattatggagccaagcctgatggcaga
actgattccacaaaagcctttcttgctgcctggatacaagcttgtggatcagttacgcca
gccaccgtgtatgtgcctgcagggaggttctttctgcgaaatatagtgttccagggtcca
tgcaagaatggtgcaatattatttcgcatagttggtacccttgtggctccatcagattat
cgagttattggtaatgcagggaattggcttttatttcagttcgtcaatggtgttacagtt
tatggtggagttcttgacggacaaggtcctgctttgtgggcttgcaaggcatctggcagg
aattgccccaccggtgccacttcactggcgttttccaattcaaataatatagcaatcagt
agactaatttcactgaatagccaaatgttccacattgtcatcaatggctgccacaacgtg
aaagtgcaaggcgtgaccgtgtctgcctccggcaacagccccaacaccgatggcattcac
gtacaattgtcgagtagtgtcgcaatcctcaactcctggattggaactggcgatgattgt
atctcaatcggtgctggcaccagtaatatgtggattgaaagagtcgcatgtggccctggc
catggaatcagtattgggagcctgggaaaggaacttcaagagccaggagtagagaatgtg
attgttaaatctgttgtatttactggaactcagaatggattgagaatcaagtcttgggcc
aggcctagcaatggcttcgtgagaaacatacgtttccaagatgctgttatgaaaaatgtc
cagaacccaattatcatcgaccaaaattactgtcctaacaacataaactgccctaatcag
ggatctggaattaaagtgagtgatgttgcatatcatggtatctggggatcatcagcaaca
ccagtggcagtgaagtttgattgtagtaggaagagcccatgcactggaatctatctgggg
gatgtgaatctgacatacaggaatcagccatctgaagcatcatgcaaaaatgccgatgga
gtagctattggtttcgttcagccaagtagctgtctgtag
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