Manihot esculenta (cassava): 110619144
Help
Entry
110619144 CDS
T05761
Name
(RefSeq) protein FIZZY-RELATED 3
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110619144
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mesc04121
]
110619144
Ubiquitin system [BR:
mesc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
110619144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_EML
WD40_Gbeta
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
ANAPC4_WD40
WDR55
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
eIF2A
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_WDR41
NBCH_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
MIOS_WD40
Beta-prop_WDR75_1st
Beta-prop_RIG_1st
Aldo_ket_red
Tricorn_2nd
Beta-prop_SPT8
Beta-prop_IFT122_2nd
Motif
Other DBs
NCBI-GeneID:
110619144
NCBI-ProteinID:
XP_021618094
LinkDB
All DBs
Position
7:complement(32294391..32297363)
Genome browser
AA seq
485 aa
AA seq
DB search
MDSPPRRKSGLNLPSGMTETSLRLDTFPGSVRAITCVSSPRALSSLSSPSKSSNCSDRFI
PCRSSSRLHTFGLVEKGSPVKEGGNEAYSRLLKSELFGSDFSSFSSPAGVQGGSALSSPS
KNMLRFKTDQSGPNSPYSPSILGYDSGISSEASTPPKPPRKVPKTPHKVLDAPSLQDDFY
LNLVDWSSQNVLAVGLGTCVYLWTASNSKVTKLCDLGPHDSVCSVQWTREGSYISIGTYL
GQVQVWDGTQCKKVRTMAGHQTRTGVLAWNSRILSSGSRDRNILQHDLRVSNDYVSKLVG
HKSEVCGLKWSHDDRELASGGNDNQLLVWNQHSQQPILKLTEHTAAVKAIAWSPHQNGLL
ASGGGTADRCIRFWNTTNGHQLNHVDTGSQVCNLAWSKNVNELVSTHGYSQNQIMVWKYP
SMAKVATLTGHSLRVLYLAMSPDGQTIVTGAGDETLRFWNVFPSVKTPTPVKDTGLWSLG
RTHIR
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggattcgccaccaagaagaaagagtggcctcaacctcccttctgggatgactgaaact
tctctgcgattggatacctttccgggttctgttcgagctataacgtgtgtatcatcacct
cgagcattatcaagcctgtcatcaccgtctaaatcttccaattgtagtgatagattcata
ccttgtagatcatcttcaaggcttcacacttttgggcttgtagagaaggggtctcccgtt
aaagaaggaggcaatgaggcctactcaaggttgttgaaatcagagctttttgggtctgat
ttttcttcgttttcttctcctgcaggtgttcaagggggttctgctttgagcagccctagc
aaaaatatgttgaggtttaagactgatcaatcagggcctaattctccatactctccttca
atcttgggatatgatagtgggatttctagtgaggcttctacacctcctaagccaccacga
aaagtccccaagacaccacataaggttttagatgccccatcacttcaagatgacttctac
ttgaatcttgtggattggtcctcacagaatgtacttgcagttgggttgggtacttgtgtt
tatctgtggactgcatcaaatagcaaagttacaaagttgtgtgacctgggacctcatgac
agtgtgtgctctgtgcaatggactcgggagggctcatacatatcaattggcacttatctc
ggtcaagttcaggtatgggatggaactcagtgcaagaaggtgcgaactatggccggccat
caaacgagaactggagttttggcatggaattctcgcatattgtcatcaggaagcagagac
aggaacatactccagcatgatcttcgtgtttcaaatgactatgttagcaagcttgttggt
cataaatctgaggtgtgtggcttaaaatggtctcatgatgacagagaacttgcttcaggt
ggaaatgataatcagctcctggtatggaaccagcattctcagcagccaattttaaaactt
accgagcacacagctgctgtcaaagccattgcatggtcaccccatcagaatggtcttctt
gcatctggaggtggaactgcagatagatgtattcgtttttggaacacaaccaatggtcat
caattaaaccatgttgacactgggagtcaggtgtgtaatctagcatggagcaagaatgtg
aatgagcttgtcagcacccatggttactcccagaatcaaatcatggtgtggaaatatcca
tcaatggcaaaggttgcaactctaactggccatagcctgcgagtactctatcttgcaatg
tcacctgatggccagacaattgttactggagcaggagatgagactcttcggttttggaat
gtattcccatccgttaaaacgccgacaccagtaaaagatacagggctttggtcgttagga
cgaactcacattcggtga
DBGET
integrated database retrieval system