Manihot esculenta (cassava): 110619169
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Entry
110619169 CDS
T05761
Name
(RefSeq) polygalacturonase QRT2
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00040
Pentose and glucuronate interconversions
mesc01100
Metabolic pathways
Module
mesc_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110619169
Enzymes [BR:
mesc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
110619169
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
110619169
NCBI-ProteinID:
XP_021618132
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Position
7:845083..848145
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AA seq
437 aa
AA seq
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MIPQHPPKHLLILFIVLTFFTCCFGSYQQNPFANFHENVHKMISKPAFSSFSKQTRASSS
TTSSSKIVLINVDDFGAKANGRDDSEAFKKAWEKACSSKQTAIIIVPKNKIYHLKPLTFS
GPCRSDLSFKIYGTIKASLKMRDYEDDRRHWIVFDNVQNLRVKGGGIINGNGRMWWRNSC
KINKSKPCKHAPTAVTFIDCKNLIVSNLWFKNAQQMHLTFQNCINVRALNLMVTAPGNSP
NTDGIHVTGTQNIRIRNSVIRTGDDCISIVSGSKNVEATDIICGPGHGISIGSLGAGNSG
AEVSNVLVNRATFSGTTNGVRIKTWQGGSGYAKNIIFQNLIMKNVSNPIIIDQNYCDQDD
PCPEKKSAVQVSNVIYRSIKGTSASEVAMKFDCSESFPCQGILLQDIILGNVEDEPAKAS
CLNVNLAHRGKVYPQCS
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgatcccacaacacccgccaaagcatttgctcattctcttcattgtcttaacattcttc
acttgttgttttggctcttaccaacaaaacccatttgctaatttccatgaaaatgtccat
aaaatgatctccaagcctgctttctctagcttttccaagcagacaagagcttcttcttct
actacaagttcatccaagattgtactgatcaatgtggatgattttggagctaaagctaat
ggaagagatgatagtgaggctttcaagaaagcatgggaaaaagcttgttcttctaaacaa
actgccattatcattgtccctaagaacaagatttatcatcttaagcctctcacattttca
ggtccatgccgttctgatcttagtttcaagatatatggaacaataaaagcttcccttaaa
atgagggattatgaagatgatagaaggcattggattgtgtttgataatgttcaaaatctc
agagttaaaggtggtggaatcatcaatggaaatggcagaatgtggtggcgaaactcttgc
aaaatcaataaaagcaagccctgtaaacatgcaccaacagctgtcaccttcatcgactgc
aagaatttaatagtatcaaatctatggttcaaaaatgcacaacagatgcatctcacattt
cagaactgtatcaatgtgagagctttgaatctcatggtgactgcaccaggaaacagtcca
aacactgatgggattcatgtcacaggcacacaaaacattagaataagaaactctgtcata
agaacaggtgatgattgtatatcaatagtcagtgggtccaaaaatgttgaagccacagat
attatctgtggacctggacatggaataagtattggtagcttgggagctggtaattcagga
gctgaagtttcaaatgtgttagttaatagagcaacattttcaggaaccactaatggagtc
agaattaagacttggcagggaggatctggatatgccaagaacataatattccaaaatctt
ataatgaaaaatgtttccaaccctataattattgatcaaaactattgtgatcaagatgat
ccatgcccagaaaagaaatcagcagttcaagtaagcaatgtgatatacagaagcataaaa
ggaacaagtgcttcagaagttgccatgaaatttgattgcagcgagagtttcccttgccaa
ggaattttattacaggatattattctaggaaatgttgaagatgaacctgctaaagcttca
tgtcttaatgttaatttagctcatagaggcaaagtttaccctcagtgctcttga
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