Manihot esculenta (cassava): 110619264
Help
Entry
110619264 CDS
T05761
Name
(RefSeq) uncharacterized protein LOC110619264
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110619264
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mesc03021
]
110619264
03019 Messenger RNA biogenesis [BR:
mesc03019
]
110619264
Transcription machinery [BR:
mesc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
110619264
Messenger RNA biogenesis [BR:
mesc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
110619264
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUFIP1
Motif
Other DBs
NCBI-GeneID:
110619264
NCBI-ProteinID:
XP_021618270
LinkDB
All DBs
Position
7:complement(26444094..26453574)
Genome browser
AA seq
541 aa
AA seq
DB search
MQSHYNSFPSQNSNQIQSNNSIAPVQGFPTNPSLVNLCNMLQNSMPVQPQLGIVNPQIPI
PFNNSSTIMPNMPPLIIQQPGFVNQLGIPQMGFAPQTNMNAIPMFVNQLIPGQPQGQPFA
FNLPQQHHHNMVFPSLQNIMQNLNPIVPMQMPNPSQADGPQNPSLFANSLFVGQQGNLNQ
QNFVEDKRTQQLQGSLLTMPKTQNSRPSTSSCRLGVPVNVGPNNHSTSNWKNFPSKDFKK
NPRKEASKMGYQKSQFHLMNNGKRKFVLSNEHKGKGFGYERTTKYGRTNPIEKTRENKRS
LALIYTEQEIKQWREERRKNYPSNANIEKKRNGRLTNHGVFDTEAKQRREQLKEILAKQA
ELGVEVAEIPSHYLSDSEKQVNERQDNGRFPSKKGRPLNKHDRRGRFNKNDRFVKQKTLE
NKDSSNTFSLNQKKPTLLQKLLSADIRRDKHHLLQVFRLMAINSFFEDWPEKPLRFPLVV
VKEDGRVDNQLVAENSSCTGKDVDGDKQDEKVEQGKCYAGGKCSLVQEIDRTEGEEGEII
D
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgcagtctcattataattcatttccttcgcaaaattccaaccaaatccaatccaacaat
agcattgctccagttcagggtttcccaacgaatccttctcttgtgaatttatgcaacatg
ttgcaaaattctatgccagttcaacctcaattgggtattgtcaatcctcaaattccaatt
cctttcaacaattccagtaccattatgccaaatatgccacctttgatcatccagcaacct
ggctttgttaatcaactgggtatacctcaaatgggttttgctccacaaaccaatatgaat
gccatcccaatgtttgtgaatcaactgatcccaggtcaacctcaaggccaaccatttgcc
tttaatttgcctcagcagcaccatcataatatggtcttccccagtctgcaaaatataatg
caaaatctgaaccccatagtgcccatgcaaatgccaaatccttctcaagcagatggtcct
caaaatcccagcttgtttgcaaattcattgtttgttgggcagcaaggcaatctgaatcag
caaaattttgtggaggataagagaactcagcaattacaagggagcttgctcacgatgcca
aaaactcaaaactcaagaccctctacttcatcctgtcggctgggtgttcctgttaatgtt
ggcccaaataatcattcaacttccaattggaaaaactttccaagtaaagacttcaaaaag
aatccgaggaaagaggcgtcaaaaatgggatatcagaagtcccaattccatcttatgaat
aatggaaagagaaagtttgtgttatctaatgaacacaagggaaaaggttttggctatgag
aggacaactaaatatggtcgcactaatcctattgagaagacgagggaaaacaaaaggtct
cttgctttgatctatactgaacaagaaatcaaacaatggcgtgaagaacgaaggaagaat
tacccgtcaaatgcaaatattgagaagaagcgcaatggaagactaactaaccatggggtt
ttcgatacagaggccaaacaacgtcgagagcaactcaaggagattttagcaaagcaggct
gagttgggagttgaagttgcagaaataccatcacactacttgtcagattcagagaaacaa
gtaaatgaaaggcaagataatggaaggtttcccagtaagaaaggtagacccttaaacaag
catgacagaagaggaagatttaacaaaaatgaccgatttgtgaagcagaaaacattagaa
aacaaggattcatctaatacattttccttaaaccaaaagaagccaacacttctacagaag
cttttgagtgcagatataaggagagataagcaccacttgttgcaggtttttaggttgatg
gccataaactctttctttgaggattggccggaaaagcctttgagatttcctttggtggta
gtcaaggaagatggtagggtggacaatcagctggtagcagaaaattcctcatgtactggg
aaagatgttgatggtgataaacaagatgaaaaagtggagcaagggaaatgttatgctggg
ggaaaatgtagccttgttcaggaaattgacagaactgaaggagaggagggagaaatcatt
gactag
DBGET
integrated database retrieval system
