Manihot esculenta (cassava): 110619374
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Entry
110619374 CDS
T05761
Name
(RefSeq) mRNA-decapping enzyme subunit 2
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110619374
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesc03019
]
110619374
Enzymes [BR:
mesc01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
110619374
Messenger RNA biogenesis [BR:
mesc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110619374
mRNA degradation factors
5'-3' decay
Decapping complex
110619374
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP2
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-GeneID:
110619374
NCBI-ProteinID:
XP_021618474
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All DBs
Position
7:30506389..30521191
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AA seq
324 aa
AA seq
DB search
MSGLNRSSSTPFKNGGLPPQELLDDLCSRFVLNVPKEDQQSFERILFLVEYAHWFYEDNS
VEKNPSLKSFTLKEFTSLMFNSCDVLRPYVAHIDDIFKDFTSYKVRVPVTGAIILDETFE
RCLLVKGWKGTSWSFPRGKKNKDEEDHACAIREVLEETGFDVSKLLNKEEYIEEMFGQQR
VKLYIIAGVKDDTAFAPLTKKEISEIAWQRLDELQPASDNVISRGITGLKLYMVAPFLES
LKLWILEHQPPVAPRLDMPIKGMCVWKAKNTSIGSSTSTAVVETQSAKPGTDAHPPDAGP
GKSFRNFRFDTAGILRAMEAGFSA
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtctcaaccgatcttccagtactccgtttaagaacggcggcctccctcctcaa
gaactccttgacgatctctgcagtcggtttgttttgaatgtgccaaaagaagatcaacaa
tcatttgagagaattctattccttgtggagtatgcacattggttctatgaagataattcg
gtggaaaagaatccttcactgaagtcattcactctgaaggagttcacatccttgatgttt
aacagttgtgatgttttgagaccttatgttgctcacatagatgacatatttaaagacttc
acttcatacaaggttcgagttcctgtaactggggcaatcattttggatgaaacctttgaa
cggtgcctgctagtgaagggttggaaagggacaagttggagttttccgcgaggcaaaaag
aacaaagatgaggaagaccatgcatgtgccatccgagaagttttggaggaaacaggtttt
gatgtttcaaaacttctcaacaaagaagaatacattgaagaaatgtttggacaacagagg
gtaaagctttacataattgctggcgtgaaggatgatactgcttttgcaccacttacaaaa
aaggagataagtgaaattgcatggcaacggcttgatgaactgcagccagcaagtgataat
gtaatatctcgtggcatcaccggccttaagctttacatggttgcaccatttttagagtcc
ttgaaattgtggatattagagcatcaacccccagtagctccaaggcttgatatgccaatc
aaaggcatgtgtgtttggaaagcaaagaacacttctatcgggagcagcactagcacagca
gtagtggagacccaatcagctaagcctggaactgatgctcatcctcctgatgccggccct
ggcaaaagctttagaaattttagatttgacactgctggaatcctgagagcaatggaagct
gggttttctgcctga
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