Manihot esculenta (cassava): 110619523
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Entry
110619523 CDS
T05761
Name
(RefSeq) pumilio homolog 4 isoform X1
KO
K17943
pumilio RNA-binding family
Organism
mesc
Manihot esculenta (cassava)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NABP
PUF
PUF_NOP9
DUF6824
Motif
Other DBs
NCBI-GeneID:
110619523
NCBI-ProteinID:
XP_021618722
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Position
7:29947245..29957168
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AA seq
1016 aa
AA seq
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MVPGSNIDMPLSLDDHLQGPNGNLEDSLHSELELILQAHRNQHLINGEKGLNIFRSGSAP
PTVEGSLSAVGSLLRNPNYSNISSINNSSSLTDDEIRSHPAYVSYYYSHNINPRLPPPLL
SKEDWRVVQRFQAGGSLQGGIGESRKKLVDEGNGSSPFLTQPGLSVQKLENDLMEVRNAN
RNNFSVQNSAEWLDRGSCGSTGLQDVGLGGRRKSFADILQEGLDRPASLSGHLSRPASDN
AFGDLLRTTGICDPHRPESCGRLESLEGLRSGSASRSLVGVQSHGTTVSFSSAIGSSLSR
STTPEPQLVVRPLNSGLPPVGNRVGPFEKKNVVGSTAPNGHSSGTTDLGETAATFSGLNL
SKSRHAEQQDFIFNTSSGHNLLQQKFIEKSNAANLLFCTNYVDVARKNRVLPNHNVADFY
SHREVMIPKRTCSFANLHSNMNSSGIGGSERSNGHHQNANVHSMDFVSHVPDAYPINYKR
ETTSLNHLDGALGGYGIGHSLNRAGNQAGPQLHAPVIDSCYIQNFQRTPDFATITNGPQV
RHCSATSNGDLDVIQKAHLEALLAQQNQQYQPAIVKSGSLNQGYHRNSSYGVGMPYLGNA
AVNYVLPAVGCGNFQDEQVAHFTSMVRNSMGGSIGSWHSHVGNNMERKYVSSLLDEFKNN
KSRSFELSDIVDHVVEFSTDQYGSRFIQQKLETATVEEKSKIFPEIIRHAHTLMTDVFGN
YVIQKLLEHGTESQRKELACQLTGHVLPLSLQMYGCRVIQKALEVIDVDKQTQMVEELDG
SVMKCVRDQNGNHVIQKCIECVPEDQIQFIISAFYGQVVALSTHPYGCRVIQRVLEHCEN
TNTQKIIMEEIMQSVCILAQDQYGNYVIQHVLEHGKPHERSVIIRKLAGQIVNMSCQKFA
SNVVETCLSFCGPDERQILVTEILGSTDENKPLQAMMKDPFGNYVVQKVLETCDERSLEL
ILSRIKVHLNTLKTFTFGKHIVSRVEKLITTGGPIVTNLSFAERRIGLSSSTSFSS
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atggtccctgggagcaacatagatatgccactgagcctagatgatcatctgcaagggccc
aatggtaatttagaagatagtttgcatagtgagctagaactgatactacaagcgcaccgc
aatcaacatttaattaatggagaaaagggtctcaatatatttaggagtggcagtgcacca
ccaactgttgagggatcattaagtgctgtgggcagtcttcttaggaaccccaattatagt
aacattagtagcattaataatagcagcagtttgactgatgatgagattcgctcacatcca
gcatatgtttcgtattattattctcacaatataaatccgagactacccccaccattgtta
tcaaaagaggattggcgtgttgtccaaaggtttcaagctggtgggtctttgcaaggaggc
attggggagtcgaggaagaagttggtagatgagggcaatggttcatcaccttttttgacg
cagcctggactttctgtacagaagttggagaatgatttgatggaagtaaggaatgccaat
agaaataatttctctgtgcagaactcggctgagtggcttgataggggctcatgtggttca
actggtttgcaagatgttgggcttggtgggaggaggaagagttttgctgacattcttcag
gagggacttgataggcctgcttctttatcaggccacctatcacgcccagccagtgataat
gcctttggtgatctgctgcgcaccacagggatatgtgatccccatcgacctgagtcttgt
ggtcgattggagtccttggagggcttgcgttcaggatctgcttctcgtagcttggtagga
gttcaaagccatggaacaactgtttctttctcatctgcaattggttcatcactgtcaagg
agtacaacacctgaaccgcagttagttgtcaggcctcttaattctggtcttcctcctgtg
gggaacagagttggcccttttgagaaaaaaaatgttgttggctctactgccccgaatggt
cattcttctggcacgactgaccttggtgagactgcggcaacgttttctggcttaaaccta
tcaaaaagtaggcatgcagagcagcaggattttattttcaacacatccagtggtcataac
cttctgcagcaaaaattcatagaaaaatccaatgcagcaaatctcttattttgtaccaac
tatgtcgacgtagcaagaaaaaacagggtcctgccaaaccataatgttgctgatttttat
tctcatagggaggttatgattcccaaaagaacttgttcttttgcaaatcttcattcgaac
atgaactcctcaggcattggaggttcggaaagatcaaacggtcatcatcaaaatgcgaac
gttcatagcatggattttgtcagccatgtacctgatgcctaccccatcaattacaagcga
gaaacaacatccctaaaccatcttgatggagctttaggtggttatggaattgggcatagt
ttgaatagagcaggaaatcaagcagggcctcaacttcatgctccagttatagactcgtgt
tatattcaaaattttcaaagaactcctgattttgcaacaattacaaatggtcctcaggtt
agacactgttctgcaacttcaaatggagacttggatgtgatccagaaagcacaccttgaa
gcattgctagctcaacaaaaccaacaatatcagcctgcaatagttaagtctggcagtttg
aatcaggggtaccataggaattcatcatatggtgttggcatgccatatctggggaatgca
gcggtaaactatgtgcttcctgcagttggatgtggaaattttcaggatgagcaagttgca
cactttacttctatggtgagaaactcaatgggaggatctattgggtcgtggcactctcat
gttggcaacaacatggaaagaaaatatgtttcatccttattagatgagttcaagaacaat
aaatccaggtctttcgaactctcagacattgttgatcatgttgttgaattcagtaccgat
cagtatgggagtcgttttattcagcagaaactagaaactgctacagttgaagaaaagagc
aagatattccctgaaattatccgtcatgctcacaccttgatgactgatgtttttggaaat
tacgtcatacaaaaattactcgagcatggtacagaaagccaaagaaaagagttggcctgt
cagcttactggtcatgttttaccactcagccttcagatgtatgggtgcagagtgattcag
aaggcgttggaggtaattgatgtggataagcagactcagatggtggaagagcttgatggt
tcagtcatgaaatgtgttcgtgatcagaatggtaaccatgttattcagaagtgcatagag
tgtgtacctgaagatcaaattcagtttataatctcagctttctacggccaagttgtggca
ctttccactcatccttatggctgtcgtgtcattcagagggtcctggaacactgtgagaac
acgaacacacaaaaaattattatggaggaaatcatgcaatctgtttgcattctggcacaa
gatcaatatgggaattatgttattcagcatgtacttgaacatgggaaaccgcatgaacga
tctgttattattaggaagcttgcgggacaaattgtaaatatgagttgccagaaatttgct
tctaatgttgtggagacgtgcctaagcttttgtggtcctgacgagcgtcaaatattggtg
accgagatccttggttccactgatgaaaataagcccttgcaggccatgatgaaagatcca
tttggaaattatgttgtgcaaaaggttcttgagacttgtgatgagcggagtcttgagttg
attctttctcgtatcaaagttcacttaaacaccctcaagaccttcacttttggcaaacat
atagtttctcgtgttgagaagctcatcacaaccggaggacctatagtaacaaacttatca
tttgcagaaaggcgcataggattgtcatcctcaacctcattttcctcataa
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