KEGG   Manihot esculenta (cassava): 110619523
Entry
110619523         CDS       T05761                                 
Name
(RefSeq) pumilio homolog 4 isoform X1
  KO
K17943  pumilio RNA-binding family
Organism
mesc  Manihot esculenta (cassava)
SSDB
Motif
Pfam: NABP PUF PUF_NOP9 DUF6824
Other DBs
NCBI-GeneID: 110619523
NCBI-ProteinID: XP_021618722
LinkDB
Position
7:29947245..29957168
AA seq 1016 aa
MVPGSNIDMPLSLDDHLQGPNGNLEDSLHSELELILQAHRNQHLINGEKGLNIFRSGSAP
PTVEGSLSAVGSLLRNPNYSNISSINNSSSLTDDEIRSHPAYVSYYYSHNINPRLPPPLL
SKEDWRVVQRFQAGGSLQGGIGESRKKLVDEGNGSSPFLTQPGLSVQKLENDLMEVRNAN
RNNFSVQNSAEWLDRGSCGSTGLQDVGLGGRRKSFADILQEGLDRPASLSGHLSRPASDN
AFGDLLRTTGICDPHRPESCGRLESLEGLRSGSASRSLVGVQSHGTTVSFSSAIGSSLSR
STTPEPQLVVRPLNSGLPPVGNRVGPFEKKNVVGSTAPNGHSSGTTDLGETAATFSGLNL
SKSRHAEQQDFIFNTSSGHNLLQQKFIEKSNAANLLFCTNYVDVARKNRVLPNHNVADFY
SHREVMIPKRTCSFANLHSNMNSSGIGGSERSNGHHQNANVHSMDFVSHVPDAYPINYKR
ETTSLNHLDGALGGYGIGHSLNRAGNQAGPQLHAPVIDSCYIQNFQRTPDFATITNGPQV
RHCSATSNGDLDVIQKAHLEALLAQQNQQYQPAIVKSGSLNQGYHRNSSYGVGMPYLGNA
AVNYVLPAVGCGNFQDEQVAHFTSMVRNSMGGSIGSWHSHVGNNMERKYVSSLLDEFKNN
KSRSFELSDIVDHVVEFSTDQYGSRFIQQKLETATVEEKSKIFPEIIRHAHTLMTDVFGN
YVIQKLLEHGTESQRKELACQLTGHVLPLSLQMYGCRVIQKALEVIDVDKQTQMVEELDG
SVMKCVRDQNGNHVIQKCIECVPEDQIQFIISAFYGQVVALSTHPYGCRVIQRVLEHCEN
TNTQKIIMEEIMQSVCILAQDQYGNYVIQHVLEHGKPHERSVIIRKLAGQIVNMSCQKFA
SNVVETCLSFCGPDERQILVTEILGSTDENKPLQAMMKDPFGNYVVQKVLETCDERSLEL
ILSRIKVHLNTLKTFTFGKHIVSRVEKLITTGGPIVTNLSFAERRIGLSSSTSFSS
NT seq 3051 nt   +upstreamnt  +downstreamnt
atggtccctgggagcaacatagatatgccactgagcctagatgatcatctgcaagggccc
aatggtaatttagaagatagtttgcatagtgagctagaactgatactacaagcgcaccgc
aatcaacatttaattaatggagaaaagggtctcaatatatttaggagtggcagtgcacca
ccaactgttgagggatcattaagtgctgtgggcagtcttcttaggaaccccaattatagt
aacattagtagcattaataatagcagcagtttgactgatgatgagattcgctcacatcca
gcatatgtttcgtattattattctcacaatataaatccgagactacccccaccattgtta
tcaaaagaggattggcgtgttgtccaaaggtttcaagctggtgggtctttgcaaggaggc
attggggagtcgaggaagaagttggtagatgagggcaatggttcatcaccttttttgacg
cagcctggactttctgtacagaagttggagaatgatttgatggaagtaaggaatgccaat
agaaataatttctctgtgcagaactcggctgagtggcttgataggggctcatgtggttca
actggtttgcaagatgttgggcttggtgggaggaggaagagttttgctgacattcttcag
gagggacttgataggcctgcttctttatcaggccacctatcacgcccagccagtgataat
gcctttggtgatctgctgcgcaccacagggatatgtgatccccatcgacctgagtcttgt
ggtcgattggagtccttggagggcttgcgttcaggatctgcttctcgtagcttggtagga
gttcaaagccatggaacaactgtttctttctcatctgcaattggttcatcactgtcaagg
agtacaacacctgaaccgcagttagttgtcaggcctcttaattctggtcttcctcctgtg
gggaacagagttggcccttttgagaaaaaaaatgttgttggctctactgccccgaatggt
cattcttctggcacgactgaccttggtgagactgcggcaacgttttctggcttaaaccta
tcaaaaagtaggcatgcagagcagcaggattttattttcaacacatccagtggtcataac
cttctgcagcaaaaattcatagaaaaatccaatgcagcaaatctcttattttgtaccaac
tatgtcgacgtagcaagaaaaaacagggtcctgccaaaccataatgttgctgatttttat
tctcatagggaggttatgattcccaaaagaacttgttcttttgcaaatcttcattcgaac
atgaactcctcaggcattggaggttcggaaagatcaaacggtcatcatcaaaatgcgaac
gttcatagcatggattttgtcagccatgtacctgatgcctaccccatcaattacaagcga
gaaacaacatccctaaaccatcttgatggagctttaggtggttatggaattgggcatagt
ttgaatagagcaggaaatcaagcagggcctcaacttcatgctccagttatagactcgtgt
tatattcaaaattttcaaagaactcctgattttgcaacaattacaaatggtcctcaggtt
agacactgttctgcaacttcaaatggagacttggatgtgatccagaaagcacaccttgaa
gcattgctagctcaacaaaaccaacaatatcagcctgcaatagttaagtctggcagtttg
aatcaggggtaccataggaattcatcatatggtgttggcatgccatatctggggaatgca
gcggtaaactatgtgcttcctgcagttggatgtggaaattttcaggatgagcaagttgca
cactttacttctatggtgagaaactcaatgggaggatctattgggtcgtggcactctcat
gttggcaacaacatggaaagaaaatatgtttcatccttattagatgagttcaagaacaat
aaatccaggtctttcgaactctcagacattgttgatcatgttgttgaattcagtaccgat
cagtatgggagtcgttttattcagcagaaactagaaactgctacagttgaagaaaagagc
aagatattccctgaaattatccgtcatgctcacaccttgatgactgatgtttttggaaat
tacgtcatacaaaaattactcgagcatggtacagaaagccaaagaaaagagttggcctgt
cagcttactggtcatgttttaccactcagccttcagatgtatgggtgcagagtgattcag
aaggcgttggaggtaattgatgtggataagcagactcagatggtggaagagcttgatggt
tcagtcatgaaatgtgttcgtgatcagaatggtaaccatgttattcagaagtgcatagag
tgtgtacctgaagatcaaattcagtttataatctcagctttctacggccaagttgtggca
ctttccactcatccttatggctgtcgtgtcattcagagggtcctggaacactgtgagaac
acgaacacacaaaaaattattatggaggaaatcatgcaatctgtttgcattctggcacaa
gatcaatatgggaattatgttattcagcatgtacttgaacatgggaaaccgcatgaacga
tctgttattattaggaagcttgcgggacaaattgtaaatatgagttgccagaaatttgct
tctaatgttgtggagacgtgcctaagcttttgtggtcctgacgagcgtcaaatattggtg
accgagatccttggttccactgatgaaaataagcccttgcaggccatgatgaaagatcca
tttggaaattatgttgtgcaaaaggttcttgagacttgtgatgagcggagtcttgagttg
attctttctcgtatcaaagttcacttaaacaccctcaagaccttcacttttggcaaacat
atagtttctcgtgttgagaagctcatcacaaccggaggacctatagtaacaaacttatca
tttgcagaaaggcgcataggattgtcatcctcaacctcattttcctcataa

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