Manihot esculenta (cassava): 110619815
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Entry
110619815 CDS
T05761
Name
(RefSeq) ABC transporter B family member 20
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
110619815
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mesc02000
]
110619815
04147 Exosome [BR:
mesc04147
]
110619815
04090 CD molecules [BR:
mesc04090
]
110619815
Enzymes [BR:
mesc01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
110619815
Transporters [BR:
mesc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
110619815
Exosome [BR:
mesc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
110619815
CD molecules [BR:
mesc04090
]
Proteins
110619815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_21
Zeta_toxin
AAA_15
APS_kinase
AAA_16
RsgA_GTPase
AAA_30
DUF87
Motif
Other DBs
NCBI-GeneID:
110619815
NCBI-ProteinID:
XP_021619071
LinkDB
All DBs
Position
7:complement(31676024..31691564)
Genome browser
AA seq
1403 aa
AA seq
DB search
MMISRGLFGWSPPHIQPLTPVSEVSEPPESPSPYLDTSAEAAAAAAAAAQAEAEEEMEEP
EEMEPPPAAVPFSRLFAYADRLDWGLMIVGSLAAAAHGTALVVYLHYFAKIVEVMRIGHD
RPEEQFERFKDLSLTIIYIAGGVFAAGWIEVSCWILTGERQTAVIRSNYVQVLLNQDMSF
FDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLVIGFINCWQIALITLAT
GPFIVAAGGVSNIFLHRLAESIQDAYAEAASVAEQAISYIRTLCAFTNETLAKYSYATSL
QATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVTHKKAHGGEIITALFAVILS
GLGLNQAATNFYSFDQGRIAAYRLYEMISRSSSTVNQDGNTLVSVQGNIEFRNVYFSYLS
RPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKL
EWLRSLIGLVTQEPALLSLSIKENIAYGRDATFDQIEEAAKIAHAHTFISSLERGYETQV
GTTGLSLTEEQKIKISVARAVLLNPTVLLLDEVTGGLDFEAERTVQEALDLLMLGRSTII
IARRLSLIRNADYIAVMEEGQLVEMGTHDELLNLDGLYAELLKCEEAAKLPRRMPAKNYT
ETAAFQIEKDSSASHSVQEPASPKLMKSPSLQRVLGVQHLDGTFNSQESPKALSPPPEKM
MENGLPLDGADKEPSIKRQDSFEMRLPELPKIDVQSANQQTSNGSDPESPISPLLTSDPK
NERSHSQTFSRPQSHSGDIPTEFKDAKDKKHRQAPSFWRLAELSFAEWLYAVLGSIGAAI
FGSFNPLLAYVIALIVTAYYRPEHPHLQQDVNKWCLIIACMGVVTVVANFLQHFYFGIMG
EKMTERVRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFSNRLSIFIQDST
AVVVAVIIGMLLQWRLALVALATLPILMVSAIAQKLWLAGFSRGIQEMHRKAALVLEDAV
RNIYTVVAFCAGNKVMELYRLQLRKIFKQSFLHGMAIGFAFGFSQFLLFACNALLLWYTA
YSVKNQYMDLPTAIKEYMVFSFATFALVEPFGLAPYILKRRKSLLSVFEIIDRVPKIDPD
DNSALKPPNVYGSIELKNVDFCYPNRPEVLVLSNFSLKVNSGQTVAVVGVSGSGKSTIIS
LIERFYDPAAGQVLLDGRDLRTYNLRWLRNHLGLVQQEPIIFSTTIRENIIYARHNASEA
EIKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEAS
SSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLMA
KNGLYVRLMQPHFAKGLRQHRLV
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atgatgatctccaggggattgttcgggtggtccccacctcatatacagccgttaacgcct
gtttctgaggtttctgagcctccggagtcgccttcgccgtacctggataccagtgctgag
gccgctgcagcagctgctgctgctgcgcaggctgaggcggaggaggagatggaggaacct
gaggagatggagcctccccctgctgctgttcctttctcgcggttgtttgcttatgctgac
cggcttgactggggtcttatgatcgttggctcgcttgctgctgctgcccatggcactgcg
cttgttgtttacttgcattattttgcgaagattgttgaggttatgcggattggacatgat
agacctgaggagcaatttgagaggttcaaagatctatctttaaccattatttacatagct
gggggtgtttttgcagctggttggatagaggtatcatgctggattctaactggggagcgt
cagactgctgtcattaggtccaactatgttcaagtattacttaatcaggatatgagcttt
tttgacacctatgggaacaatggggacattgtaagccaagtattgagtgatgtgctgctc
attcagtctgctcttagtgaaaaggttggaaactatattcataacatggcaacgtttttt
agtggtcttgttattggatttatcaactgctggcagattgcccttataacattagccact
ggtccattcattgttgctgctggaggtgtatcaaatatatttcttcacaggctggcggag
agtattcaagatgcatatgctgaagctgctagtgttgctgaacaggcaatctcatatatt
aggaccttatgtgcatttacaaatgaaacgctggccaagtattcttatgcaacctcatta
caagcaactctgagatatggtattttgattagccttgtgcaaggacttggacttgggttt
acatatgggcttgcaatatgttcttgtgccttacaactatgggtgggaaggttcttggtt
acacataagaaagctcatggtggtgaaataattacagcattgtttgctgttattttgagt
ggcctagggctaaaccaagcagcaacaaacttctattcatttgaccaaggacgaattgct
gcttatagactttatgagatgataagccgatcttcctccacagtcaatcaagatggaaat
acgctagtgtctgtgcaaggaaatatcgagtttagaaatgtatatttcagctatctgtct
cgtcctgagatccctatcttgagtggattttacctcactgttcctgctaaaaaagctgtg
gcacttgttggcagaaatggctctggaaaaagcagtattatccccctcatggagcggttt
tatgatcctaccttaggagaagttcttttagatggagagaatattaaaaacctgaagttg
gaatggctcagaagcctaataggactagtcacccaggaaccagccttgctgagtttaagc
ataaaagagaatattgcatatggaagagatgctacttttgatcagattgaagaagctgcc
aaaatagcacatgcccatacatttatcagttcacttgagaggggctatgagacacaggtg
ggcacaactggcttatcattgacagaggaacagaaaattaaaatttctgtagctagagca
gtgctgttgaatccaacagttcttctgcttgatgaggttactggtggacttgattttgaa
gctgagagaacagttcaggaggctctagatctcctcatgttgggacggtcaaccataata
atagctcgacgacttagtcttattagaaatgctgattacattgctgtaatggaggaaggt
cagcttgttgaaatgggtacgcatgatgaactattaaacctggatggtctatatgctgag
cttctcaaatgtgaagaagctgcaaaacttccaaggaggatgccagctaaaaactatacg
gagactgctgctttccaaattgaaaaggattcttctgccagccacagcgtccaggaacca
gcgtctcctaaattgatgaaatcaccatctcttcagagagttctgggtgttcaacatctg
gatggcacctttaactcacaagaatcaccgaaagctttgagcccaccaccagaaaaaatg
atggaaaatggtcttcccttggatggagctgataaggaaccatcaataaaaaggcaggat
agttttgaaatgcgactgccggagttgcccaaaattgatgtccagtctgccaatcaacaa
acatcaaatggttcagatcctgaatcacctatatcaccccttttgacatctgatcctaaa
aatgaacgttcccactcacagacttttagtcggcctcaaagtcactcaggtgatattcca
actgaatttaaggatgcaaaggataaaaagcatcgacaggcaccgtctttttggagactg
gcagaacttagctttgcagagtggctatatgctgttttaggaagcattggtgctgctata
tttggttcctttaatccacttcttgcttatgttattgcgctcatagtgactgcttattat
aggcctgaacatcctcacttgcagcaggatgtaaacaagtggtgcttgatcattgcctgc
atgggtgtggtgacagttgttgcgaattttttgcagcacttctattttggaattatgggt
gaaaaaatgaccgaacgagttcggagaatgatgttttcagcaatgctgcgcaatgaagtt
ggatggtttgatgaagaggagaatagtgctgacacattgtccatgcggttggctaatgat
gctacatttgtgcgagcagcatttagcaaccggctttcaatatttatacaggacagtact
gctgttgttgttgctgttatcattgggatgctgctccagtggcgattggctcttgtggca
ttggcaaccttgcctattctcatggtttctgcaattgctcagaaattgtggcttgctgga
ttttcaaggggcatccaggagatgcacaggaaggcagcactggtccttgaggatgctgtt
agaaacatttatactgttgtagcattctgtgctggtaacaaagtaatggagctttacaga
ttgcaactgaggaaaatattcaagcagagttttttacatggaatggccattggttttgca
tttggattttcacagtttcttctatttgcctgtaacgcacttcttctctggtacactgca
tactctgtaaagaatcagtatatggatctgcctacagccatcaaagagtatatggttttc
tcgtttgcaacatttgctctagttgagccttttggattagctccatatattcttaaacgg
cggaaatctctcctttcagtatttgaaattatagatcgagtgcccaagattgatccagat
gataactcggcactgaaaccacctaatgtctatgggagcattgagttgaagaatgttgat
ttctgttatcctaatcgccctgaagtgttggtactcagtaatttcagtctcaaagttaat
agtggacaaactgtagccgtggtaggagtttcaggttctgggaagagcactataatctct
ttaattgagagattttatgatccagctgctggtcaggttctactagatggacgagatttg
agaacttataatttgagatggctaagaaaccacctaggtctggtgcagcaggaaccaatt
atcttctcaacaaccataagagaaaacattatatatgctaggcacaatgctagtgaagct
gagataaaagaggctgcgagaatagcaaatgctcaccacttcatcagcagcctgcctcat
ggttatgacacacatgtgggaatgaggggtgtggacctgacaccagggcagaagcagaga
attgctattgctcgagtggtgctgaagaacgcgcccatcttgttattggatgaagctagc
tcgtccattgaatctgaatctagcagagtggtgcaagaggcattggatacactgataatg
ggaaacaaaacaaccattctgatagctcatagggctgcaatgatgaggcatgttgacaat
attgtggttctaaatggagggcgaattgttgaagaagggacccatgactctttgatggca
aagaatggcttgtatgttaggttgatgcaaccccactttgcaaagggtttacgacagcat
cgacttgtctaa
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