Manihot esculenta (cassava): 110619929
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Entry
110619929 CDS
T05761
Name
(RefSeq) rRNA (cytosine-C(5))-methyltransferase NOP2C isoform X2
KO
K21971
methyltransferase NSUN6 [EC:2.1.1.-]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mesc03016
]
110619929
Transfer RNA biogenesis [BR:
mesc03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
110619929
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
PUA
Methyltransf_31
RsmF-B_ferredox
FtsJ
NSUN5_fdxn-like
Ubie_methyltran
Motif
Other DBs
NCBI-GeneID:
110619929
NCBI-ProteinID:
XP_021619141
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Position
2:23963140..23979693
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AA seq
599 aa
AA seq
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MKKARDLLKPTRRAFLSLARPPSPSPTAVPLPPQMDPSERYCYNPRLQWNPEVEDYFIKA
YGADNFSRISHALTRPSTYSCIRVNTLKTTTDAVVQKLKAIMKETGFEDCTMAEDGPNDN
PTNELEDSLQNSPIAKCQIPGLEYVLFVKGSGPHSIDYGVAPGAPPKEVIVSRKCAEAVL
RGAQVFVPGVMACSAHVEKGDAVAVSVAIEQHGPDGGWAIGMTRGTVLQGLQTDPYYSER
YGLYIGQGITKMSRAGIFRVSEGIAVDMNNRVFKLPSFHDVLEGEIFLQNLPSIVAAHAL
DPQKGERILDMCAAPGGKTTAIAILMKDEGEIVAADRSHNKVLDIQKLAAEMSLTCITTY
KLDALKAVRRRNESNDNVTVQSSEPLRFHEEKTFSTVQVLNPEKVRNEIVSNEKENERTY
VSKADIRKSNRRMRNGPGRNQCLGGRVENSKGFDPDSFDRVLLDAPCSALGLRPRLFAGE
ETVGSLRNHAKYQRRMFDQAVKLVRPGGVIVYSTCTINPGENEALVRYALDTYKFLSLAQ
QHPRIGGPGLIGGYEFPDGYVEEWLRPGEEELVQRFDPSSPLDTIGFFIAKFVVGPKNI
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagcgagggatttgcttaaacccactcgtagagccttcctttccctggccaga
cctccttctccttctcctactgctgttcctcttcctccacagatggatccatcagagcgc
tactgttacaatccgagactgcaatggaatcctgaggttgaagactacttcatcaaagcc
tatggagctgataatttctctcgcatttctcatgcactcacgcgtccttctacctattct
tgcattcgagtcaacacactaaagacaacaactgatgctgttgttcagaagctgaaggca
attatgaaagaaactgggtttgaagattgtactatggcagaagatgggccaaatgataat
ccgaccaatgagctggaggatagcttgcaaaatagccccatcgctaagtgccagatacct
gggttggaatatgttttgtttgttaagggttcgggaccacactcaattgattatggtgtt
gcaccaggagcacctcctaaggaggtaattgtgagtagaaaatgtgctgaagctgttctc
cgaggtgctcaggtatttgttcctggtgtaatggcttgtagtgcacatgttgaaaaagga
gatgcagttgcagtttcagttgctatagagcaacatggtcctgatggtggatgggctatt
ggtatgacacgtgggactgttctacaaggacttcagacagatccttattattctgaaaga
tatggcctgtatattggtcaaggtataacaaaaatgtcaagggctggcatatttcgtgtt
tcagaaggaattgctgtggatatgaataatcgggtgtttaaattgccttcttttcatgat
gtgcttgagggggaaatatttcttcagaacttgcctagcattgtcgctgctcatgcctta
gatcctcaaaaaggtgaacgaatactagacatgtgtgcagcaccaggagggaagacaact
gcaattgcaatccttatgaaggatgaaggagagattgttgcagctgatagatctcataat
aaggtgctggatattcagaaattggctgctgaaatgagcttgacatgtataacaacttat
aagctggatgctctcaaagctgttcgtcgaagaaatgaatccaatgataatgtcactgtt
caaagttctgaaccattgaggtttcacgaggagaaaacattttctactgttcaagtgctg
aatccagaaaaagtacgcaatgaaattgttagcaatgaaaaagagaatgagagaacttat
gttagcaaagctgacatcaggaagagtaaccgaagaatgaggaatgggccaggaaggaat
cagtgcctgggtggtagggtcgagaattcaaaaggttttgatcctgacagctttgatcga
gttctccttgatgctccttgttcagctcttggtttgcgacctaggctttttgctggagag
gaaactgtaggatctttaagaaatcatgcaaagtaccagaggagaatgtttgaccaggct
gttaaactagttcgccctggtggagttattgtgtattccacatgcacaataaaccccggt
gagaatgaagcactggtacgatatgctctggatacatacaagttcctctctttagcacaa
cagcacccaagaattggaggacctggccttattggtggatatgaatttcctgatggatac
gtcgaggagtggttaagacctggagaggaagaacttgttcagaggtttgatccatcatct
cccctcgacacaattggatttttcattgccaagtttgtggttggccccaaaaacatttaa
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