KEGG   Manihot esculenta (cassava): 110620030
Entry
110620030         CDS       T05761                                 
Name
(RefSeq) proliferating cell nuclear antigen
  KO
K04802  proliferating cell nuclear antigen
Organism
mesc  Manihot esculenta (cassava)
Pathway
mesc03030  DNA replication
mesc03410  Base excision repair
mesc03420  Nucleotide excision repair
mesc03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    110620030
   03410 Base excision repair
    110620030
   03420 Nucleotide excision repair
    110620030
   03430 Mismatch repair
    110620030
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mesc03032]
    110620030
   03400 DNA repair and recombination proteins [BR:mesc03400]
    110620030
DNA replication proteins [BR:mesc03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    110620030
DNA repair and recombination proteins [BR:mesc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     110620030
   MMR (mismatch excision repair)
    Other MMR factors
     110620030
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    110620030
SSDB
Motif
Pfam: PCNA_C PCNA_N Rad9 Ribosomal_L14
Other DBs
NCBI-GeneID: 110620030
NCBI-ProteinID: XP_021619279
LinkDB
Position
1:34945671..34947942
AA seq 266 aa
MLELRLVQGSLLKKVLEAIKDLVNDANFDCSSTGFSLQAMDSSHVALVALLLRSEGFEHY
RCDRNISMGMNLNNMSKMLKCSGNDDIITIKADDGSDTVTFMFESPTQDKISDFEMKLMD
IDSEHLGIPEAEYHAIVRMPSAEFAKICKDLSSIGDTVVISVTKEGVKFSTRGDIGTANI
VVRQNTTVDKPEEATVIEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSSELPVVVEYK
IAEMGYIRFYLAPKIEEDEDETKPHV
NT seq 801 nt   +upstreamnt  +downstreamnt
atgttggagcttagacttgtccaaggatcccttttgaagaaagtgcttgaggccatcaag
gacttggtcaatgatgccaatttcgattgctcgtcgacgggcttctctctccaggccatg
gattcaagccacgttgctctggtggctctcctcctcagatccgagggttttgagcactat
cgatgtgaccgtaacatttccatgggcatgaatctcaataacatgtccaagatgttgaaa
tgctctggaaatgatgatatcatcaccatcaaggctgacgatggcagtgatactgtcact
ttcatgtttgaaagtcctacacaagacaaaatttcagattttgagatgaaactaatggac
attgatagtgagcacctaggcattcctgaggcagaatatcatgctattgtcaggatgcca
tcagctgagtttgcaaaaatttgtaaagatctttcaagcattggtgacactgttgtgatc
tctgtgacaaaggaaggtgtaaagttctccacgagaggcgatattggcactgcaaatatt
gttgtcaggcagaatactacagtagataagccagaagaagcgacagtcatagaaatgaat
gaacctgtgtcattgacatttgcattgaggtacatgaactccttcactaaggcgacccct
ttgtcaaacactgttacaatcagcttgtcttcagagctgcctgttgtggtcgaatacaag
attgctgagatgggttatatcaggttctacttggctccaaagatagaagaagatgaggat
gagactaagccccacgtttaa

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