Manihot esculenta (cassava): 110620119
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Entry
110620119 CDS
T05761
Name
(RefSeq) syntaxin-71 isoform X2
KO
K08506
syntaxin of plants SYP7
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
110620119
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mesc04131
]
110620119
Membrane trafficking [BR:
mesc04131
]
SNARE
SNAP-25[C] (Qc)
Syp7
110620119
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
DUF5089
Ran-binding
XhlA
NPV_P10
Motif
Other DBs
NCBI-GeneID:
110620119
NCBI-ProteinID:
XP_021619397
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All DBs
Position
8:943788..949097
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AA seq
265 aa
AA seq
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MSVIDILTRVDVICKKYDKYDLEKHKDLNVSGDDAFARLYAVVESDIEAALQKADLASKE
KNKASAVALNAEIRRTKAKLLEEIPKLQRLAIKKVKGLSTEELAARNDLVLALPDRIQAI
PDGTAAASKQTGGWGASASRTEIKFDSDGHFDSEYFQENETSSQFRQEYEMRRMKQDQGL
DMISEGLDTLKNMAHDMNEELDKQVPLMDEIDTKVDKATADLKNTNVRLKDTVNQLRSSR
NFCIDIILLCIILGIAAYLYNVLKK
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgatcgacattttaaccagagttgatgtgatctgcaagaagtacgacaagtac
gacctcgaaaagcacaaggatctcaatgtctctggcgacgatgcctttgctcgtctctac
gccgttgttgagtctgatatcgaagccgctcttcagaaagcagaccttgcttcaaaagag
aaaaataaagcatctgcagttgctttgaacgcggagattcgtcgaacaaaggctaaattg
ctggaggagatccctaagttgcagagattggccataaagaaggttaaagggctctcaacg
gaagagcttgctgcccgtaatgatttggtccttgcattaccagataggattcaagctata
cctgatggaactgcagctgcttccaaacaaactggaggctggggagcttcagcatcccgt
actgaaatcaaatttgattcagatggtcattttgatagtgaatactttcaagaaaatgag
acatctagtcaattcaggcaggaatatgaaatgcgtaggatgaagcaggatcaaggttta
gatatgatttcagaaggtttggatactctgaaaaacatggctcatgacatgaatgaggaa
ttggataagcaagttcctttgatggatgaaattgacacaaaggtggataaagcaacagct
gacctcaaaaataccaatgttaggctcaaggacactgttaaccagttgagatctagcaga
aacttctgcattgatattattttgttgtgcataattctgggaattgctgcctatctatac
aacgtgctgaagaagtga
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