Manihot esculenta (cassava): 110620135
Help
Entry
110620135 CDS
T05761
Name
(RefSeq) rhamnogalacturonan I rhamnosyltransferase 1 isoform X1
KO
K23280
rhamnogalacturonan I rhamnosyltransferase [EC:
2.4.1.351
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
mesc01003
]
110620135
Enzymes [BR:
mesc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.351 rhamnogalacturonan I rhamnosyltransferase
110620135
Glycosyltransferases [BR:
mesc01003
]
Polysaccharide
Structural polysaccharide
110620135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
O-FucT
Motif
Other DBs
NCBI-GeneID:
110620135
NCBI-ProteinID:
XP_021619429
LinkDB
All DBs
Position
1:30387396..30391097
Genome browser
AA seq
505 aa
AA seq
DB search
MLKMCKPDNSVKEWEVKVKLFGDGKVEKLKNSMVSRSPMKLWILRAITTALLWTCVVHLM
ALGEMWGPRLLKGWPSCFGRSEVEISSVPAKVLLPPKRVYKNNGYLMVSCNGGLNQMRAA
ICDMVAIARYLNVTLVVPELDKTSFWNDPSEFQDIFDVDHFISSLRDEVRILKELPPRLK
RRVELGMFYSLPPISWSNISYYHHQILPLVQKYKVVHLNKTDARLANNGLPLEIQKLRCH
VNFNALKFTSQIEELGRRVVRILREKGPYLVLHLRYEMDMLAFSGCTKGCSSEEVEELTR
MRYAYPWWKEKVINSEMKRKEGLCPLTPEETAIVLSALGIDRNVQIYIAAGEIYGGEKRM
KSLAATFPNLQVRKETLLGPSDLMFFQNHSSQMAALDYLVSLEGDMFVPTYDGNMAKVVE
GHRRFLGFKKTISLDRKLLVGLIDQYKEGSLSWDEFSTTVKEVHADRMGSPKMRVVIPEK
PKEEDYFYANPCECLQLVDEPLSDT
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaatgtgcaagccggataactctgttaaagagtgggaggtgaaagtgaagctt
tttggagatggaaaggttgaaaagttgaagaattcaatggtttcaaggtctccaatgaag
ctatggattttaagggcaatcacaactgccctgctatggacttgtgtggtacatttgatg
gcactgggagagatgtgggggccaagattgttgaagggttggccttcttgttttggtcgt
tctgaagtcgagatatcttctgttcctgccaaagttcttcttcctcctaagagggtttat
aagaataatgggtatctaatggtttcctgcaatggtggactcaaccaaatgcgagcagca
atatgtgacatggttgccattgctagatatcttaatgtaactctcgttgtccctgagttg
gataaaacctcattctggaatgatccaagtgagttccaagacatatttgatgttgatcat
ttcatctcttccttgagagatgaggttcgtatattgaaagagctgccgcctaggttaaaa
cgacgagttgaattgggaatgttctactcattgccaccaattagttggtcaaacatatct
tactaccaccatcagattctacctttggtgcaaaagtacaaagttgtacatctcaataaa
actgatgctcgtcttgctaacaatggcctaccccttgagattcaaaagttgcgttgccac
gtaaattttaatgctctgaagtttacatcacagatagaggaactgggtagaagggttgtc
aggattttaagggagaaaggcccgtacctggtccttcatctcagatatgaaatggatatg
ttggctttctctggctgcaccaaaggttgcagcagtgaagaggttgaggaactgacaaga
atgaggtacgcatatccctggtggaaggaaaaagttataaattctgaaatgaaaaggaag
gaaggtctgtgtcctttgacacctgaggaaactgctattgtactgagtgcactgggcatt
gatcgtaatgttcaaatttatattgctgctggagaaatttatggtggagagaaaagaatg
aagagtttggcagcaacattccctaatttgcaggttaggaaagaaactcttctgggacca
tcagatttgatgtttttccagaaccactcatcccaaatggcagcattggattatctcgta
tcgctggagggcgacatgtttgttcctacatatgatggcaacatggctaaagttgtcgaa
ggccatcgcagatttttaggattcaagaagactatttcactggacagaaagcttctagtt
ggtttaatagatcaatacaaagagggatcattgagttgggatgagttctctaccactgtg
aaggaagttcatgctgatcggatgggaagtccaaaaatgagagttgtaatacccgaaaaa
ccaaaggaagaagattatttctatgccaatccatgtgagtgtttgcaactggtagatgaa
ccattgagtgacacatga
DBGET
integrated database retrieval system
