Manihot esculenta (cassava): 110620243
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Entry
110620243 CDS
T05761
Name
(RefSeq) prolycopene isomerase, chloroplastic
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00906
Carotenoid biosynthesis
mesc01100
Metabolic pathways
mesc01110
Biosynthesis of secondary metabolites
Module
mesc_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
110620243
Enzymes [BR:
mesc01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
110620243
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GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
FAD_oxidored
GIDA
Thi4
HI0933_like
Pyr_redox_2
FAD_binding_3
GMC_oxred_N
MCRA
Motif
Other DBs
NCBI-GeneID:
110620243
NCBI-ProteinID:
XP_021619584
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Position
8:3631597..3636926
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AA seq
608 aa
AA seq
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MSSGLSSTVQLCSFRPRSQNCRFGSVSFNSHGLNKYNSVPSFDSDKKLGKVNSGFCQLKK
DFVLSAKQGLTVDKEVDVEGNGGVSKERSNFDAIVIGSGIGGLVAATQLAVKGARVLVLE
KYVIPGGSSGYYQRDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCKMEVIPDPTTVHF
HLPNNLSVRVHREYGDFISELISRFPHEKEGILKFYGDCWKIFNALNSLELKSLEEPIYL
FGQFFQKPLECLTLAYYLPQNAGDIARKYIKDPELLSFIDAECFIVSTVNALQTPMINAS
MVLCDRHFGGINYPVGGVGGIAKSLASGLIDQGSEILYKANVTNIILEHGKAVGVRLSDG
REFFAKTIISNATRWDTFGKLLKGEKIPEEEENFQKVYVKAPSFLSIHMGVKAEVLPPDT
DCHHFVLEDDWARLEGPYSSIFLSIPTVLDSSLAPEGHHILHIFTTSSIEDWEGLPLKDY
EAKKELVANEIISRLEKKLFPGLRSSIYFMEVGSPKTHRRYLARDKGTYGPMPRGTPKGL
LGMPFNTTAVDGLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADIGLEKKSPVLDAALLRL
LGWLRTLA
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaggactcagcagtactgtacagttgtgtagtttcagacccaggagccagaat
tgtagatttggctctgtttctttcaattctcacggtctcaataaatataattccgtaccc
agtttcgatagtgataagaaacttggcaaagtgaattcgggtttttgccagttgaagaaa
gattttgttttgagcgcaaagcaaggtttgactgtagataaagaggtggatgtagaagga
aatggaggagtcagcaaagaaaggagcaactttgatgccattgttattgggtctggaatt
ggtgggttggttgctgctacacagctggcggtgaagggagctagggttttggttttggag
aagtacgtgattcctggcggtagctctggctattaccagagggatggttatacattcgat
gttgggtcttctgtgatgtttggtttcagtgataagggaaacctgaatttgataacacaa
gcattggcagcagttggttgtaagatggaggtgattcctgatccaaccactgtccatttt
catctgccaaataatctttctgttcgagttcatagagagtatggtgacttcatctcagaa
cttatttctagattccctcatgaaaaggaggggatcctcaaattctatggtgactgttgg
aagatattcaatgccttaaactcattggaattgaagtcactggaggagccaatttacttg
tttggacaattctttcagaagccccttgaatgtttgacactggcttactatcttcctcaa
aatgctggagacatagctcgaaagtacataaaggatcctgagttattgtcttttatcgat
gcagagtgttttatagtgagcacagttaatgcattgcagacaccaatgattaatgcaagc
atggttctatgtgataggcattttggagggattaactaccctgttggtggtgttggtggt
attgctaagtcgttggctagtggtctgatcgaccaagggagtgagattttatacaaggca
aatgtgactaacatcatactagagcatggaaaagctgttggagtgaggctgtcagatgga
agagagttctttgccaaaaccataatatccaatgccaccagatgggatacctttggaaag
ttgttaaaaggagaaaagattccagaagaagaagaaaatttccaaaaagtttatgttaag
gctccatcttttctttctattcacatgggtgttaaagctgaggttctgccaccagataca
gattgccatcattttgtgcttgaggatgactgggcaagattagagggcccttatagcagt
atatttttaagcattccaactgttcttgattcatcgctagctcctgaggggcaccatatt
cttcacatatttacaacttcttccatagaagactgggagggactcccgcttaaggactac
gaggcaaagaaggagcttgtggcaaatgagataataagcagattggagaagaaactgttt
ccagggctcagatcatctatttattttatggaggtggggtcaccaaagacacacagacga
tacctagctcgtgataaaggcacctatggaccaatgccacgtggaactcctaaaggcttg
cttggaatgccattcaatacaacagctgtagatggtctttactgtgttggcgatagctgc
tttcctggacagggtgtgatagctgtagccttttccggagtcatgtgtgctcaccgagta
gctgctgacattggactggagaaaaaatcccctgtattggatgctgctctccttcgactt
ctcggctggttaaggacattggcatga
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