Manihot esculenta (cassava): 110620267
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Entry
110620267 CDS
T05761
Name
(RefSeq) multisubstrate pseudouridine synthase 7 isoform X6
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mesc03016
]
110620267
Enzymes [BR:
mesc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
110620267
Transfer RNA biogenesis [BR:
mesc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
110620267
Prokaryotic type
110620267
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
R3H_PUS7L
Motif
Other DBs
NCBI-GeneID:
110620267
NCBI-ProteinID:
XP_021619624
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Position
8:36979303..36987470
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AA seq
809 aa
AA seq
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MWCPSTLSLRCFSFLKPYPSSYRNSNYRKTTTATIPIAGCCLNSLMETAKTTTDEFNVGI
FSYVSQLPGFHAILKQRYSDFIVNEVDKDGIVVHLTSLEVPPQIVEAIQEGEKEILNQIG
KSYTVEIELFRSLAGDSDAERLEAFITQVATQSEDNSYIYPIILSPNSDKAHRTAIHNFF
KEKFKFLVTDTVDGPDASRKCIRVRLKSGVHSNRVRNFKKLKDRGDQPFDSRGSNNWPQH
LGKFLRFHLYKENKDTHEAIGLIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQHASRL
AALNDRLIGIRVGNFCHVTEKLLLGQLLGNRFTITLQGVVADSEDTIKMSADSLGKRGFI
NYFGLQRFGIGYMPTHLIGAALLRGEWKSAVSMILDPREGERDVVRKAREYYKESGDIEG
TLRQLPRNLIAERAILQCMKKCPGNYLQALKAIPTTLRMMYVHSYQSYLWNHAASVRVQK
YGTDEVVVGDLVYFKGDDTERETLGVNSECEDDSCDDMYDCSNSDPTSGTHHPERKNTHV
KAATAEDISLGNYTIDDVILPLPGSRVSYPTNDIAKVYHDLAKKDSINLAESVHSIKEFS
ITSITGRYRRVFQKPMALEWHASLFSSYGFVDLDIWTNSCYFSLYRELLLYTDGSIPLAE
MDLEKIAKDKSKHLFKEEKRANGNEDKNPSDCMRQPMSFQNDIHPSTDHNETEDERGLGK
SQSNSFCDSTSQGAQMALKLSFTLPASSYATMAIRELLKTSTSRKFRKTVTLEEFVSLLL
FLLVLAGVGAFFLVLQLFTDKNYQMKLIS
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgtggtgccctagcactctgtcgttgcggtgcttttcatttctaaaaccatacccgtcg
tcgtaccgaaactccaattatcgtaaaacgaccaccgccaccattcccatcgccggctgt
tgtctaaattctctgatggaaactgccaaaacgaccacagatgaattcaacgtcggtatc
ttctcctatgtctctcaacttcctggctttcacgccattctcaagcaaaggtattcggat
tttatagtgaacgaagttgataaggatggaattgtagttcatttgacctctctggaagtt
cctccacagattgtggaggccatacaggagggagagaaggagatattgaatcaaattggg
aaaagttacaccgttgaaatcgaattgttcaggtcacttgcaggtgattctgatgcggag
cgcttagaagcctttattactcaagttgctactcaaagtgaagataacagttacatttat
cctatcattctttccccgaattctgataaagcccatcggacggcaatccataatttcttc
aaggagaagttcaagttccttgttactgatacagttgatggacctgatgcttcacggaaa
tgcattcgtgtgagattgaagtctggagtacatagcaatagagtaagaaatttcaagaaa
cttaaggacagaggtgatcagccctttgatagccgaggttcaaataattggccacagcac
cttggcaagtttcttaggtttcacctttacaaggagaataaagatacacacgaagccata
ggattaataggaaagatgcttggcattcagccacgatcttttgggtttgcgggtacaaag
gataagcgctctgtatcgacacaaagggttactgttttcaagcagcatgctagtagacta
gcagctcttaatgacagattgattggtatcagagtaggtaacttctgccatgtcactgaa
aaacttctccttgggcagctcttaggtaatcgattcaccatcacattacaaggagttgtt
gcagattctgaagataccatcaaaatgtctgcagattcattaggaaaacgtgggttcatc
aattactttggtttacaacgttttggtattggttacatgccaacacatctcattggtgct
gcattacttcgaggagagtggaaaagtgctgtaagcatgatccttgatccaagagaaggg
gaaagagatgtggtaaggaaggcccgggaatattacaaggaaagtggtgatattgaaggg
accctaaggcaactacctcgcaatctgattgctgaaagggccatacttcagtgtatgaag
aaatgccctggcaactacctgcaggccctgaaagcaatacctacaactttaagaatgatg
tatgtacacagttatcaaagctatttatggaaccatgcagcaagtgtgagagtacaaaaa
tacggaaccgacgaagttgtggtgggggatttggtgtatttcaaaggagatgatactgaa
agagagacattaggagttaattctgaatgtgaagatgatagctgtgatgacatgtatgat
tgcagtaattcagatccaacttctggaacacatcatcctgaaaggaagaatactcatgtt
aaggcagcaactgcagaagacatctctctggggaattataccattgatgatgtcatcctt
ccattgccaggatctagggtgtcttatccaacaaatgacattgccaaagtttatcatgat
ttggcaaagaaggattctataaacttggctgagagtgtgcatagtatcaaggaattttca
ataaccagcataactggaagatatcgacgtgttttccagaagccaatggccttggaatgg
catgcctcacttttctcatcatatggctttgttgatctagatatttggaccaattcttgt
tatttctctttgtacagggaattactcttgtataccgatggaagtataccattggcggaa
atggatttggaaaaaattgctaaggataagtctaagcatttattcaaagaagagaaaaga
gccaatggaaacgaggacaaaaacccatctgattgcatgagacaaccaatgagctttcaa
aatgatatacatccatcaacagatcacaatgagactgaggatgagagaggattagggaag
tctcaatctaattctttttgtgactctacttctcagggagctcaaatggctctcaagtta
agcttcactcttccagcctcatcttatgccacaatggccatacgagagctgctgaagaca
tcaacatctaggaaattcaggaaaaccgtcactttggaagaatttgtcagtctgcttctt
tttcttcttgttcttgctggagtgggtgcattcttccttgttctgcaattgttcactgac
aaaaattatcaaatgaaactgatttcatag
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