KEGG   Manihot esculenta (cassava): 110620328
Entry
110620328         CDS       T05761                                 
Name
(RefSeq) zinc finger protein JACKDAW
  KO
K25870  zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
mesc  Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mesc03000]
    110620328
Transcription factors [BR:mesc03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    110620328
SSDB
Motif
Pfam: C2CH-4th_BIRD-IDD C2H2-2nd_BIRD-IDD C2CH-3rd_BIRD-IDD zf-C2H2 zf-C2H2_jaz zf-met zf-C2H2_STOP2_C zf-C2H2_4 zf-C2H2_6
Other DBs
NCBI-GeneID: 110620328
NCBI-ProteinID: XP_021619709
LinkDB
Position
8:954941..958015
AA seq 512 aa
MQMMSGDAFSIPSSIPLFAPEEQNANPNPKTNPVPKKKRNLPGTPDPDAEVIALSPKTLM
ATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLRQRTNKEVIRKKVYICPEKTCVHHDPS
RALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTREYKCDCGTLFSRK
DSFITHRAFCDALAEESARISSVPATNLNFRNDTVNFPRGEPAGGGVQDIAGISQFSSGF
RPDFNGFPSLSADQQKTGLSLWLNQANSQINPADIVPNHANLYASSSSTGLPEMVQMGSN
LYGSSSTTNFGNLKLSGLPHGLKEEEGSNKGLNMVDSLPSLYSDSHQNRQSKPAAPMSAT
ALLQKAAQMGSTRSNQSFFGSNSHGLMSSSSSSNTTNLNTLSQNRNELHQVFQNVNKQPE
CNITVTSSVAMGDAIMVVSSGLDQVAMQSSGRQNDPFQLKVQPGSTSLESGLTRDFLGMS
AQSGRPFLPQELAKFASMSSAMGLSQFTNNPN
NT seq 1539 nt   +upstreamnt  +downstreamnt
atgcaaatgatgtctggtgatgctttctccattccttcttctataccactgtttgctcct
gaagaacagaatgcaaaccctaaccctaaaactaatcctgtgcccaagaagaagagaaat
ttgcctggaacaccagatccagatgctgaagttattgctctatctcctaagactctcatg
gctacaaacagatttatttgcgaaatatgcaataaaggtttccaaagagaccaaaacttg
cagcttcatcggagaggtcacaatcttccatggaaactaaggcaaaggaccaacaaagaa
gtcatcagaaagaaagtttatatatgcccagaaaagacctgcgttcatcatgatccgtcg
agagctcttggggatctcaccggaataaaaaagcattatagccggaaacatggagagaag
aaatggaagtgtgagaagtgttctaagaaatatgcagttcaatctgactggaaagctcac
tccaagacttgtgggactagagaatataaatgtgattgtggaactctattttccaggaaa
gatagctttatcacccatagagccttttgtgatgccttagctgaagaaagtgcaagaatc
agttcagttcccgcaaccaatctaaatttcagaaatgacacagttaattttcctcgtgga
gaacctgcaggcggcggagttcaagatattgcaggcatttctcaattcagttcaggtttt
agaccagatttcaatggctttccttctctcagtgctgatcaacagaagactggattgtcc
ctgtggctaaatcaggcaaattctcagatcaatcctgcagatattgtgcccaatcacgct
aatctttatgcatcttcaagttcaactggcttgcctgagatggtgcaaatgggatcgaat
ctttatggttcatcatccaccaccaattttggtaatttaaagttatcaggacttccacat
ggactaaaagaagaagaaggtagtaacaaggggcttaatatggtagattcattgccttct
ctgtattccgatagtcatcaaaacagacaatcaaagccagctgcacccatgtccgccact
gctcttcttcaaaaagcagctcaaatgggttccacaagaagcaatcaatctttctttggg
agcaatagtcatgggctaatgagttcgtcctcttcatccaatacaacaaacctcaatact
ctcagccagaacagaaatgagctgcaccaagttttccaaaatgttaataagcaaccggag
tgtaatataacagtcacaagcagtgtagctatgggcgacgctataatggtcgtatcaagc
ggtcttgatcaagtagcgatgcagtctagtggaagacaaaatgacccatttcagttgaag
gtgcaaccaggttcaacttctttagaaagtggtttaacaagagatttccttggcatgagt
gctcaatctgggcgtccatttttaccccaagagctagctaaatttgcttcaatgagctca
gccatgggtctgagccaattcactaacaatcctaattaa

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