Manihot esculenta (cassava): 110620328
Help
Entry
110620328 CDS
T05761
Name
(RefSeq) zinc finger protein JACKDAW
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mesc03000
]
110620328
Transcription factors [BR:
mesc03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
110620328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-met
zf-C2H2_STOP2_C
zf-C2H2_4
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
110620328
NCBI-ProteinID:
XP_021619709
LinkDB
All DBs
Position
8:954941..958015
Genome browser
AA seq
512 aa
AA seq
DB search
MQMMSGDAFSIPSSIPLFAPEEQNANPNPKTNPVPKKKRNLPGTPDPDAEVIALSPKTLM
ATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLRQRTNKEVIRKKVYICPEKTCVHHDPS
RALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTREYKCDCGTLFSRK
DSFITHRAFCDALAEESARISSVPATNLNFRNDTVNFPRGEPAGGGVQDIAGISQFSSGF
RPDFNGFPSLSADQQKTGLSLWLNQANSQINPADIVPNHANLYASSSSTGLPEMVQMGSN
LYGSSSTTNFGNLKLSGLPHGLKEEEGSNKGLNMVDSLPSLYSDSHQNRQSKPAAPMSAT
ALLQKAAQMGSTRSNQSFFGSNSHGLMSSSSSSNTTNLNTLSQNRNELHQVFQNVNKQPE
CNITVTSSVAMGDAIMVVSSGLDQVAMQSSGRQNDPFQLKVQPGSTSLESGLTRDFLGMS
AQSGRPFLPQELAKFASMSSAMGLSQFTNNPN
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatgatgtctggtgatgctttctccattccttcttctataccactgtttgctcct
gaagaacagaatgcaaaccctaaccctaaaactaatcctgtgcccaagaagaagagaaat
ttgcctggaacaccagatccagatgctgaagttattgctctatctcctaagactctcatg
gctacaaacagatttatttgcgaaatatgcaataaaggtttccaaagagaccaaaacttg
cagcttcatcggagaggtcacaatcttccatggaaactaaggcaaaggaccaacaaagaa
gtcatcagaaagaaagtttatatatgcccagaaaagacctgcgttcatcatgatccgtcg
agagctcttggggatctcaccggaataaaaaagcattatagccggaaacatggagagaag
aaatggaagtgtgagaagtgttctaagaaatatgcagttcaatctgactggaaagctcac
tccaagacttgtgggactagagaatataaatgtgattgtggaactctattttccaggaaa
gatagctttatcacccatagagccttttgtgatgccttagctgaagaaagtgcaagaatc
agttcagttcccgcaaccaatctaaatttcagaaatgacacagttaattttcctcgtgga
gaacctgcaggcggcggagttcaagatattgcaggcatttctcaattcagttcaggtttt
agaccagatttcaatggctttccttctctcagtgctgatcaacagaagactggattgtcc
ctgtggctaaatcaggcaaattctcagatcaatcctgcagatattgtgcccaatcacgct
aatctttatgcatcttcaagttcaactggcttgcctgagatggtgcaaatgggatcgaat
ctttatggttcatcatccaccaccaattttggtaatttaaagttatcaggacttccacat
ggactaaaagaagaagaaggtagtaacaaggggcttaatatggtagattcattgccttct
ctgtattccgatagtcatcaaaacagacaatcaaagccagctgcacccatgtccgccact
gctcttcttcaaaaagcagctcaaatgggttccacaagaagcaatcaatctttctttggg
agcaatagtcatgggctaatgagttcgtcctcttcatccaatacaacaaacctcaatact
ctcagccagaacagaaatgagctgcaccaagttttccaaaatgttaataagcaaccggag
tgtaatataacagtcacaagcagtgtagctatgggcgacgctataatggtcgtatcaagc
ggtcttgatcaagtagcgatgcagtctagtggaagacaaaatgacccatttcagttgaag
gtgcaaccaggttcaacttctttagaaagtggtttaacaagagatttccttggcatgagt
gctcaatctgggcgtccatttttaccccaagagctagctaaatttgcttcaatgagctca
gccatgggtctgagccaattcactaacaatcctaattaa
DBGET
integrated database retrieval system