Manihot esculenta (cassava): 110620372
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Entry
110620372 CDS
T05761
Name
(RefSeq) transcription elongation factor TFIIS
KO
K03145
transcription elongation factor S-II
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mesc03021
]
110620372
Transcription machinery [BR:
mesc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
110620372
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GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
Baculo_LEF5_C
DUF530
Zn_ribbon_Elf1
Motif
Other DBs
NCBI-GeneID:
110620372
NCBI-ProteinID:
XP_021619768
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All DBs
Position
8:complement(40443841..40446673)
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AA seq
342 aa
AA seq
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MEIELVELFEVTTKAADAAASEGVSSNGPEVVRCVDALKQLKKFPVTYDILVSTQVGKRL
RPLTKHPREKIQTVASDLLEIWKKVVIEETTRKKNGAVDNKSSGKAEISMGETVNIEKAQ
KAGAVKVEKIDREEAIRVERVPKEEKRASNVKKPSQAPIAPPKLTALVKCNDALRDKVRE
LLVEALSKVASEVDEDARDEVSAWDPIRIAVAIESAMFEKMGRSNGAQKVKYRSIMFNMK
DPNNPDLRKRVLLGEVKPERLITMTPEEMASAQRQRENNQIKEKALFDCERGGPPKATTD
QFKCGRCGQRKTTYYQMQTRSADEPMTTYVTCVNCNNHWKFC
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggaaatagagctggtggaattgtttgaggtcacgacgaaagccgctgatgccgctgcc
agtgagggagtttcctccaatggaccggaggtggtgaggtgcgtcgatgcactgaaacag
ctcaagaagtttccggttacttatgatattttggtatctactcaggttggtaaacgactt
cgacctctcacaaagcatcctagggaaaaaatccaaactgtggcctctgacttgctagag
atttggaaaaaggtagttattgaagagaccactagaaagaaaaatggtgctgttgataat
aaaagttcagggaaagctgagatttcaatgggagagaccgttaacattgagaaggctcaa
aaagcaggtgcagtaaaggttgaaaagattgatcgagaagaagctatcagggttgaaagg
gtgcccaaagaggagaaacgtgcttctaatgtaaagaaaccatcacaagcccccattgct
ccaccaaagctgactgcattagtgaaatgcaatgatgctttacgtgacaaagttcgtgaa
cttcttgtggaggccttatccaaagttgctagtgaggttgatgaggatgccagggatgaa
gtaagtgcatgggacccaatccgaattgctgtagccatagaatctgcaatgtttgaaaag
atgggtcgttcaaatggagcccaaaaggtcaagtataggtccataatgttcaacatgaag
gacccaaataaccctgatttgcggaaaagggttctgcttggagaggtcaaaccagagaga
ctcatcacaatgacacctgaagaaatggcaagtgcacagagacaacgtgaaaataaccaa
atcaaagagaaagcattatttgattgtgagcgtggtggtccgccaaaagctacaactgat
cagtttaagtgtggtcgttgtggtcagcgcaagaccacttactatcagatgcagactagg
agtgcagatgaacctatgacaacatatgtaacttgcgtaaactgcaacaatcattggaaa
ttttgctag
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