Manihot esculenta (cassava): 110620386
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Entry
110620386 CDS
T05761
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit C
KO
K03252
translation initiation factor 3 subunit C
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
mesc03012
]
110620386
Translation factors [BR:
mesc03012
]
Eukaryotic type
Initiation factors
eIF-3
110620386
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF-3c_N
PCI
TRI5
Motif
Other DBs
NCBI-GeneID:
110620386
NCBI-ProteinID:
XP_021619792
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Position
8:3887126..3892678
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AA seq
930 aa
AA seq
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MASRFWGQGGSDSEEEESEFEEDIDNEAAGESTTQAPQNRYLRGTASDSDDSDDQKRVVR
SAKDKRFEEMSATVDQMKNAMKINDWVSLQESFDKINKQLEKVMRVTESDKVPTLYIKAL
VMLEDFLNQALANKEAKKKMSSSNAKALNSMKQKLKKNNKQYEDLINKYRENPESEEEEE
GDEETEEEEDSDSEFVEDPSKIAMSDEDEEDDEDRQDNRTEIEGDWQKMMSKKDKLMDRQ
FMKDPSEITWDTVNKKFKEVVAARGRKGTGRFEQVEQLTFLTKVAKTPAQKLEILFSVVS
AQFDVNPGLSGHMPINIWKKCVQNMLVILDILVQYPNIVVDDMVEPDEKETQKGTDYDGT
IRVWGNLVAFLERIDVEFFKSLQCIDPHTREYVERLQDEPMFSVLAQSVQEYLERVRDFK
AASRVALRRVELIYYKPQEVYDAMRKLAEQADDGEKSGEEPKVEESKGPSAFVATLELVP
RKPTFPESSRTMMDMLVSLIYKYGDERTKARAMLCDIYHHALLDEFSTSRDLLLMSHLQD
SVQHMDISSQILFNRAMAQLGLCAFRVGLITEGHGCLSELYSGGRVKELLAQGVSQSRYH
EKTPEQERLERRRQMPYHMHINLELLEAVHLICAMLLEVPNMAANTLDAKRKVISKTFRR
LLEVSERQTFTGPPENVRDHVMTATRALTKGDFQKAFDVIKSLDFWRLLRNRDSVLEMLK
AKIKEEALRTYLFTYSSSYGSHSLDQLTKMFDLSGAQIHSIVSKMMINEELHASWDQPTQ
CIVFHDVEHTRLQVLAFHLTEKLSVLAESNERAIEARIGGGAGLDLPMRRKDGQDYASMA
AGGGKWQDNSSFTQGRQGSGRSGYNVGGGRPPALSQGTGGGYSRGTRSGGYSGGSRYQDG
AYGGPGRTGVRGSQMDGSNRMVNLNRGVRA
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggcatctcgtttctggggacagggtggcagcgactctgaggaggaagagagtgaattt
gaagaagatattgataatgaggcagcaggcgagtctaccactcaagccccacaaaacagg
tatctcaggggaaccgctagtgatagtgatgactctgatgatcaaaagcgtgttgtcaga
tccgccaaagacaaacgatttgaggagatgtcggctactgttgatcaaatgaagaatgca
atgaagatcaatgattgggttagcttacaagagagctttgataaaatcaataaacagctt
gagaaagtcatgagggtgacagaatctgacaaggtccccaccctttacatcaaagctctt
gtgatgttggaggatttcttgaatcaggctttggcaaataaggaagcaaagaagaagatg
agcagtagtaatgctaaggccttgaactcaatgaagcagaaactgaagaagaacaataag
caatatgaggatttgattaataaatatagagagaatccagagagtgaggaggaagaggag
ggagatgaggagacagaagaggaggaagattcagactcagagtttgtggaggacccttca
aagattgcaatgtctgatgaggatgaagaggatgatgaagatcgtcaggataatcgaact
gagattgaaggtgattggcagaagatgatgagcaagaaagataagctcatggatagacag
ttcatgaaagatcctagtgaaataacctgggatacagtgaacaaaaagtttaaagaggtt
gttgctgctcgaggtaggaagggaactggaaggtttgagcaggttgagcaactaactttc
ttgactaaggtcgctaagacccctgcacagaagcttgagattctttttagtgtggtctct
gcccagtttgatgtgaatccaggacttagtggtcatatgcccataaacatatggaagaaa
tgcgtgcagaatatgctggttattcttgatattctggtccagtatcctaacattgtagtg
gatgacatggttgagcctgatgagaaagaaacccagaaggggacagactatgatggaact
attcgggtttgggggaacttggtggctttccttgagcggatagatgttgagttcttcaag
agtttgcaatgtattgatccacatacacgtgaatatgttgagagactgcaggatgaacct
atgttttcggtgctcgctcaaagtgtccaagagtatctagagagggtcagagacttcaaa
gctgcatcaagggttgcccttaggcgggttgagctgatctactacaaaccgcaagaggtt
tatgatgctatgaggaaactggctgaacaggcagatgatggtgaaaagtcaggggaggag
cctaaggttgaggaaagtaagggtccatctgctttcgttgccactctagagcttgtgccc
cgaaagcctaccttccctgagagcagcagaacaatgatggatatgttggtctctctcata
tacaagtatggagatgagcgaactaaagctcgtgcaatgctttgtgatatttaccaccat
gcactattggatgagttctcaacctcccgggacttgttattgatgagtcacctgcaggat
agtgtccaacatatggacatttcatcccagattcttttcaacagggctatggcacagctt
ggtttatgtgcattccgtgttgggctaatcactgaaggacatggttgcctttctgaattg
tattccggtggaagggtaaaggaattgctggcacaaggtgtttcacaaagtcggtatcat
gagaagactccagaacaggaaaggctggaaaggagacgccagatgccatatcatatgcac
ataaatcttgagcttctagaggcggttcatctcatttgtgccatgctgctggaggtcccc
aacatggcagccaacactcttgatgctaagcgcaaagtcattagcaagacatttaggcgg
ttgcttgaggtgagtgagaggcaaactttcacaggccctcctgaaaatgtcagggatcat
gtgatgactgccactcgagctcttactaagggagatttccagaaggcctttgatgttatc
aagtctcttgatttctggaggcttctaaggaacagagacagtgtccttgagatgcttaag
gccaagatcaaggaagaagctctgaggacctacctttttacctactcatcctcttatggg
tcgcatagcttggaccaactcaccaaaatgtttgatctctctggagcccagattcacagc
attgttagcaagatgatgatcaatgaagagctgcatgcgagttgggaccagccaacacag
tgcatcgtctttcatgatgttgagcacacaaggttgcaggttctggcattccacttaaca
gagaagctatcagttcttgctgaaagtaatgaaagggcaatagaggcaaggattggtggt
ggtgctggtttggatttgcctatgaggcggaaagatggccaggattatgctagcatggct
gctggtggtggcaagtggcaagacaattcatctttcactcaggggaggcaagggtcaggg
cgttcaggatataatgttggtggtgggagaccaccagcattaagccaaggtactggtggt
ggttattcaagagggacacgttcaggtggatattctggaggttcacgataccaagacggt
gcatatggcgggccaggaagaactggagtgaggggatctcaaatggatggttctaaccgt
atggttaatcttaacaggggagttcgtgcttaa
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