Manihot esculenta (cassava): 110620396
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Entry
110620396 CDS
T05761
Name
(RefSeq) non-structural maintenance of chromosomes element 4 homolog A
KO
K22825
non-structural maintenance of chromosomes element 4
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mesc03400
]
110620396
DNA repair and recombination proteins [BR:
mesc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
110620396
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Nse4_C
dsDNA_bind
Motif
Other DBs
NCBI-GeneID:
110620396
NCBI-ProteinID:
XP_021619809
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Position
3:complement(20242417..20245419)
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AA seq
390 aa
AA seq
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MGRTLNREPTHSRNANDRQLRAVKREQMSRNRVGSGRDDSTQQHELDRRALRSKYLALHN
KINDERDVLTRVDSEKFNSMIKEVEDLHQHVQKPREQVADAEALLGLTSTLVSSVKSQSN
EGITAADFVSCVLSQFGQSNRTLDEENLSSLIKWKEIGLAVSPIFRKCNGFNTMVGPMNT
ELKQRRIPVRNNRKRARPTERSQPEEVDNTGAEEKKDTDNNMSTMFEILRRKKRVPLENL
ILNRRSFAQTVENLFALSFLVKDGRVQITMDESGAHFVLPRNAPAANSVMSGEVTFRHFV
FRFDFKDWQLMMNVVSNGDELMPDRKSLATSESEPATNNIQVQGTLNRTPIRKFSRNRGL
IVQEDSVVEESPEIEATKAIGSFRCKRKLT
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgggcagaactctgaatcgagaacctactcatagtaggaatgccaacgaccgacaactc
agagcagtaaagcgtgaacaaatgagtcggaatcgcgttggctccggcagagacgattcc
actcaacaacatgaactcgatcgacgggccctccggtctaagtatcttgcgttacataat
aagatcaatgatgagagagatgttttaacgagagtggattcggaaaagtttaattccatg
attaaggaagtcgaagatttgcaccagcatgtgcaaaaaccaagagagcaagttgcggat
gcagaagcattactgggtcttacaagcacactggtgtcatctgttaaatcacagtcaaac
gagggcattactgctgcagactttgtttcttgtgtgctctcacagtttgggcaatcgaat
agaacactggatgaagaaaatttgtctagtttgatcaagtggaaagagattgggcttgct
gtttcccctattttcaggaaatgtaatgggttcaatacaatggttggaccaatgaatacc
gagttgaagcaaaggaggatcccagttagaaataatagaaaacgtgcaaggccaacagaa
agatctcaaccggaggaggttgataatactggggcagaagagaaaaaagatactgataat
aatatgtcaacaatgtttgagattttaaggaggaaaaaacgggttccacttgaaaatttg
atcttgaatagaaggtcttttgcacagactgtggagaatttgtttgcactgtcattctta
gttaaagatgggcgggttcagataactatggatgaaagcggtgctcactttgtcttacca
aggaatgctcctgctgccaattctgtaatgtcaggagaagtcacatttaggcattttgtg
ttcagatttgatttcaaggattggcagctaatgatgaatgtggtgtctaatggtgacgag
ctaatgccagataggaaaagtttggccacttctgaatcggagcctgcaactaacaatatc
caagtccaaggaacgcttaacaggacaccgatcaggaaattctctaggaaccgtggtctt
attgtgcaagaagattcagttgtagaagagtctcctgaaattgaagctacaaaagccatt
ggctcctttaggtgtaagcgtaagctcacttag
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