Manihot esculenta (cassava): 110620418
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Entry
110620418 CDS
T05761
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mesc04131
]
110620418
04121 Ubiquitin system [BR:
mesc04121
]
110620418
Enzymes [BR:
mesc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110620418
Membrane trafficking [BR:
mesc04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
110620418
Ubiquitin system [BR:
mesc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110620418
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-ANAPC11
zf-C3HC4_3
zf-RING_5
Zf_IFT144_1st
Motif
Other DBs
NCBI-GeneID:
110620418
NCBI-ProteinID:
XP_021619838
LinkDB
All DBs
Position
8:38468857..38470436
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AA seq
353 aa
AA seq
DB search
MGDAMVDRYWCHMCSRMVTPVMEAEIKCPVCESGFVEEMDSTRDLNNNGIELGSERALSL
WAPILLGMMGGLGPSRARAQEQNTSNGQEENGELEREFRSLFRRTRRRRSPASILGMLQD
LRSGSENSENNGESNTSNNNNSNSLILVNPFNEEALVFQAPFDANQPENPIRNMASSLGD
YLIGPGLDLLLQHLSENDPNRYGTPPAQKEAVQAMPTVAVDQSLQCSICLEEFDVGDEAK
EMPCKHKFHSGCILPWLEIHSSCPVCRFQMPCDDSKIQANGSRSNEGRIENNDAMAEVGE
GGDRIGNGRRYWIPVQWPFEGLFSVSASQNDGSSTSATPAAAMPGNPSNADET
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgggggatgcaatggttgatcgatactggtgtcatatgtgctcaaggatggtgactcca
gttatggaagctgagattaaatgtcctgtctgtgaaagtgggttcgttgaagaaatggac
agcacaagagacctcaataacaatggcattgagcttggatcagaacgtgcactctctcta
tgggctccaatcctgcttggaatgatgggtggtttaggtccttctcgtgcacgagctcaa
gaacagaacaccagcaatggacaggaagaaaatggtgaactcgagcgagagtttcgatct
ttgtttcggaggacgaggaggaggagaagcccagcttcaatccttggtatgcttcaggat
cttcgttcaggttcagagaattctgaaaataatggggagagtaatactagcaataacaac
aacagtaacagtttgattttggttaatccttttaatgaagaggccttagtttttcaagct
ccttttgatgcaaatcaacctgagaacccgattcgaaacatggcaagttccttgggggac
taccttataggacctggtttggatttattgcttcagcatttgtcagaaaatgatcctaat
cgttatgggactcctcctgcacaaaaagaagcagttcaagcaatgccaactgttgctgtt
gatcagagtttgcagtgttcgatatgcctcgaggagtttgatgttggagatgaagcaaaa
gagatgccatgtaaacataaattccatagtgggtgtattcttccctggctggagattcat
agttcttgcccagtttgcaggttccaaatgccttgtgatgattcaaagattcaagctaat
ggctccaggagcaacgaagggcgaatcgagaacaatgatgctatggcagaagtgggagaa
ggaggagacagaataggcaatgggagaagatattggattcctgttcaatggccatttgaa
ggattgttttctgtgtcagcatcccaaaatgatgggagttctacttctgcaactcccgca
gcagccatgccgggaaatccatctaatgcagatgaaacttga
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