KEGG   Manihot esculenta (cassava): 110620424
Entry
110620424         CDS       T05761                                 
Name
(RefSeq) zinc finger CCCH domain-containing protein 3 isoform X1
  KO
K13152  U11/U12 small nuclear ribonucleoprotein 20 kDa protein
Organism
mesc  Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mesc03041]
    110620424
Spliceosome [BR:mesc03041]
 Other splicing related proteins
  Minor spliceosome components
   Minor spliceosome specific factors
    110620424
SSDB
Motif
Pfam: zf-CCCH zf-U1 zf_CCCH_4 Arc_trans_TRASH zf-CCCH_4 zf-CCCH_2 C2H2-zf_KIN17 Torus zf-C2H2_DHX34 zf-CCCH_10 Glyco_hydro_125 B129_C2H2-zf
Other DBs
NCBI-GeneID: 110620424
NCBI-ProteinID: XP_021619842
LinkDB
Position
8:34808995..34810664
AA seq 158 aa
MPLGKYYCDYCGKEFQDTPVARKRHLQSSSHHRAKSLWYNSFKSTDPNQAYIDGGAGFAK
GVCNRFVKSGFCPYGDSCKYLHPTSSNNLQTNGSLSQATGLMNNVQSPVILGNQLVGGIS
LPGDMLRDSMGMPWGNLPPSLQPPPEGGYPPFPFVDWG
NT seq 477 nt   +upstreamnt  +downstreamnt
atgccgttgggaaagtattactgtgattactgcggcaaggaattccaagacactccggtt
gcccggaaacggcatctccagagttcttctcaccaccgagccaaatccctctggtacaac
tccttcaaatccacagaccccaaccaggcttacatcgacggcggcgccggctttgctaaa
ggagtctgcaatcggttcgtcaaatcgggattttgtccttacggggattcttgtaagtac
ttgcatcccaccagcagcaacaaccttcaaactaatggtagtctttctcaagctacaggc
ctcatgaataatgttcagtcaccagttattctaggaaatcaattagttggaggaatctct
ttgcctggcgatatgttaagagatagcatgggaatgccatggggtaatctgcctccatca
ctacagcctcctccagagggtggatatccgccttttccatttgtggattggggttag

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