Manihot esculenta (cassava): 110620448
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Entry
110620448 CDS
T05761
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF2
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mesc04131
]
110620448
04121 Ubiquitin system [BR:
mesc04121
]
110620448
Enzymes [BR:
mesc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110620448
Membrane trafficking [BR:
mesc04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
110620448
Ubiquitin system [BR:
mesc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110620448
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1117
zf-RING_2
Zn_ribbon_19
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_11
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_16
zf-HC5HC2H
zf-HC5HC2H_2
VPS18_RING_C
DUF7129
Zn_ribbon_8
DUF1272
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
110620448
NCBI-ProteinID:
XP_021619880
LinkDB
All DBs
Position
8:complement(25225074..25226591)
Genome browser
AA seq
360 aa
AA seq
DB search
MASMGSSFWCYRCNRFTMLRIQAIHDSIFCPDCGGGFVEDIGTPSRSPPHLSFPASAMYP
SNSDHITTSRLRRSNRRGGGDRSSFNPVIVLRGPAYGGGADDGASGDFELYYDDGVGSGL
RPLPASMSEFLMGSGFDRLLVQLTQLEINGIGRAERAPASKSAIESMPLIKILSSHVSME
SYCAVCKEPFEIHTEAREMPCKHIYHSDCILPWLSLRNSCPVCRHELPTDVHGNGSSPES
GEEAMGLTIWRLPGGGFAIGRFSGGRRAEGTELPVVFTEVDGGFNTAGAPRMISWAPSRR
RSRESRGLGRAFRNFFSFFGRIGRRVSDESGLRRRHRTNSMLDRSSRRENSPWVMQDNQW
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaatgggatcttctttttggtgctacagatgcaatcgtttcacaatgcttagg
attcaggcaatccatgattcgatcttttgccccgactgcggcggcggtttcgtcgaggat
attggaaccccttctcgttccccaccccatctttcgttccccgcttctgcaatgtaccct
tctaattcggatcatattaccacctcaagattaaggcgcagcaaccgtcggggtggtggt
gatcgctcctctttcaatccagtcatcgttctccgcgggcctgcatatggtggtggcgca
gatgatggagcttctggggacttcgagctatactatgacgatggtgttgggtctggacta
cgtcctttaccggcgagcatgtcggagtttttgatgggatcgggatttgaccggctcctt
gttcagttgactcaattggaaatcaacggcattggtcgagctgagcgtgcaccagcttca
aaatcggcaatcgagtcaatgcctctgatcaagatactctctagccacgtctctatggaa
tcttactgtgcagtttgtaaagagccatttgaaattcacacggaggcgcgcgagatgcca
tgtaagcatatatatcattccgattgcatccttccgtggttatctcttcgcaattcttgt
ccagtttgtcggcatgagctaccgacagatgttcatggaaatggcagttcaccggaatca
ggtgaggaggccatgggattaacgatatggagactgccgggtggtggttttgcgataggg
agattcagcgggggaaggagagcggagggaacggagcttcctgttgtgtttacggaggtg
gatggtgggttcaacactgcaggtgcacctaggatgatttcatgggcacccagtagaagg
agatcaagagaaagtagagggttgggccgtgcttttcgcaatttcttttccttttttgga
aggataggaaggcgtgttagtgacgaatctggtttaagacgaagacatagaacaaattca
atgttggataggtcctcaaggagagaaaattcaccttgggttatgcaagataatcaatgg
tga
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