Manihot esculenta (cassava): 110620486
Help
Entry
110620486 CDS
T05761
Name
(RefSeq) protein SCARECROW
KO
K27742
protein SCARECROW
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mesc03000
]
110620486
Transcription factors [BR:
mesc03000
]
Eukaryotic type
Other transcription factors
GRAS
110620486
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GRAS
TPP_enzyme_M_2
Motif
Other DBs
NCBI-GeneID:
110620486
NCBI-ProteinID:
XP_021619939
LinkDB
All DBs
Position
8:complement(40024726..40028280)
Genome browser
AA seq
829 aa
AA seq
DB search
MSASELFSENGRDADLNGSCSNNNRNNSSKGEEPIIGIQGKGKMVRKRMACEMMEVQTAD
QNQRCYRRISGGGGTTDSLPEDNIIGCTSSLTNIINPNQNQNQNQNPNPNPYPVLNYSTM
TVLPSSTNLTSMTSGGSVSVSLCGFLSSTGTTNFSSNDFLSSSSQLQAPAVCGFSGLPLF
PSERDRQRNAAVPVVLSTSSTTGGGGAAAAAAAAATAITMDDASATAWIDGIIKDLIHSS
ANVSIPQLIQNVREIIFPCNPSLASLLEYRLRSLAEPIPNYPVDRRRKEALPHRDYSNQV
QASSGLTLNLENVNSYTSLPDSTAAVATASPVVNQYSSWGTTPSLVCQGNNQQLHHQLQL
LHDEQQQQESPSSTSVTPPLLALNQGHPQQQEYEKSSSAETEQVANTGIATTPTSVAAAG
ISSREKKEELRQQKRDEEGLHLLTLLLQCAEAVSADNFEEANKILLEISELSTPYGTSAQ
RVAAYFSEAMSARLVNSCLGIYATLPSVPLSHTQKMASAFQVFNGISPFVKFSHFTANQA
IQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPSGPPYVRLTGLGTSMETLEATGKRL
SDFAQKLGLPFEFFPVAEKVGNLDPEKLNVSKREAVAVHWLQHSLYDVTGSDTNTLWLLQ
RLAPKVVTVVEQDLSHAGSFLGRFVEAIHYYSALFDSLGASYGEESEERHVVEQQLLSRE
IRNVLAVGGPSRSGELKFHNWRDKLQQSGFKGISLAGNAATQATLLLGMFPSDGYTLVED
NGALKLGWKDLCLLTASAWRPFHGITANATAIATTSIHNQYHLQRFATV
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgtctgagttgttttctgaaaatggtagggatgctgatttgaatggaagctgc
agcaacaacaatagaaataacagcagcaaaggagaagaacccataataggaatccaaggg
aaaggaaagatggtgagaaagaggatggcctgtgagatgatggaggtgcaaacagcagac
caaaaccagagatgttatcggaggattagtggtggtggtggcaccaccgattctctccca
gaagacaatattattggctgcacctcttctttgactaatattattaaccctaaccaaaac
caaaaccaaaaccaaaatccaaacccgaacccatacccagtgctcaactactccactatg
actgtgctaccttcttccaccaacttgacatccatgacgtcaggagggtctgtgtctgta
tctttgtgtgggtttctatcttcaacagggacaaccaacttttcttcaaatgacttcctc
tcatcatcatctcagctccaggccccagccgtttgtggcttctctggtctacccttgttc
ccttctgagagagatagacaacgaaacgctgctgttcccgtcgtccttagtacttccagt
acaactggtggtggtggtgctgctgctgctgctgctgctgctgctactgctattaccatg
gacgacgcctccgccaccgcctggattgatggcatcattaaggacctaatccatagctcc
gccaacgtttccattcctcagcttattcagaatgtaagggagattatattcccttgcaac
cccagtctcgcttcccttctcgagtacagactccgttccctagctgagccgataccaaat
tatccggtggataggaggaggaaggaagctctgcctcatagggactacagtaatcaagtg
caagcctcttctggactcactctcaatcttgaaaatgtcaatagttacacttcgttaccg
gattctactgcagctgtggctacggcgtctcctgtagtcaatcaatattccagctgggga
accacgccatcgctggtctgccaaggtaacaaccagcagctacaccatcaacttcagctt
cttcatgatgagcaacagcaacaagaaagcccctcttctacttcggtaacaccacctctt
cttgcattgaatcaagggcatccacaacagcaagaatatgaaaaatcttcatcagcggaa
acagaacaagtagccaacaccggaatagcaacgacaccaacgtcagtagctgctgctggt
attagctccagggagaagaaggaagagttaaggcagcagaagagggacgaagaaggtttg
caccttctaaccttacttctccaatgtgcggaggcagtctcggcggataatttcgaggag
gcaaacaagatattattagagatctcggagctctccacgccttacgggacgtcggcacag
agggtggcagcttatttctctgaggcaatgtccgcgaggctggtgaattcttgcttgggc
atatacgcgacgttaccgtcagtgccgcttagccacacccaaaagatggcctcagcgttt
caagtgtttaacggaatcagccctttcgtaaagttctctcatttcacggcaaatcaggcg
atacaagaagcgttcgagagggaggacagggtgcacataatagatctagacatcatgcaa
gggttgcaatggccggggctatttcacattctagcatcaagacccagtggacctccatat
gtacgtcttacagggcttgggacatccatggaaactctggaggcaactgggaagcgtttg
tctgattttgcccagaaactaggcctcccttttgaattctttccggtggcggaaaaagtt
ggaaatttagacccagaaaagctaaatgtcagcaagagggaggccgtggcggtgcactgg
ttgcagcactccctctacgacgtcactggttccgacaccaatacgctctggttgttgcag
agattggcaccgaaagtggtgacagtagtagaacaggacctgagccatgcgggatcattt
ctgggcaggttcgtggaggccatacactactactcggcgctgttcgactcattaggagca
agctacggggaggagagtgaggagagacatgtggtggagcaacagttgctgtctagagaa
atacgtaatgtgttggctgttggagggccttcgcgaagcggagaattgaagtttcacaat
tggagggacaagctacaacaatctgggttcaaaggcatatctctagccggaaatgcagcc
actcaggccactctactcctcggcatgttcccctccgatggctacaccttggtggaagac
aacggagctctcaagcttggttggaaggatctttgcttgcttactgcttcggcttggagg
ccatttcatggaatcaccgccaatgcaacggctatagcaacaaccagcatccataatcaa
taccatcttcagcgatttgctactgtgtag
DBGET
integrated database retrieval system
