Manihot esculenta (cassava): 110620502
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Entry
110620502 CDS
T05761
Name
(RefSeq) heat stress transcription factor A-3
KO
K09419
heat shock transcription factor, other eukaryote
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mesc03000
]
110620502
Transcription factors [BR:
mesc03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
110620502
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSF_DNA-bind
HIP1_clath_bdg
Spc24
COG6_N
SSNA1
YabA
PilN_bio_d
CC_Bre1
APG6_N
Motif
Other DBs
NCBI-GeneID:
110620502
NCBI-ProteinID:
XP_021619963
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All DBs
Position
8:2095649..2098561
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AA seq
563 aa
AA seq
DB search
MEPDEEKSPKSSSKPSDSSSTPEPEKKPSLSQPLIGSRMFPPGSLSMEDLSYSDSPLPAS
VASPLTEFGAFSATNESVYSPLEMYEFGANPISERVPTGKSSAVDTGDYAEENVGVPHPL
ASLQEIPIPPFLSKTYDLVCDRSLDPIISWGTTGESFVVWDPVEFARVILPRNFKHNNFS
SFVRQLNTYGFRKIDSDKWEFANEAFRRGERHLLKNIQRRKSPQSQQVGSHNGPFTEAGK
SELESEIERLRKERSMMMQEVVELQQEQHGVVHHVQAVHQRLQGAEQRQKQMISFLAKLF
QNPEFLARLRQKKKQGDVGLSRIKRKFVKHQQREPGQSESPAEGHIVKYRPEWTNLSSST
LVPDVSPAPVEQTCDYIFQEMVEMGKDAEGMAFQLENVPPNESAISDELALAQGYIKTLE
QFQEGESNLGSEDLQIKGKNVISPEQKVPPEYLVSFPEDLATEKNFPEFSSSGIERQEDV
WTMGFDNQAGMSSSSQELWGNLVNYDVPELGSTGGFSDIWDLGSIQVAGSSGVQNWQADE
HPVNEPDSHASQPGDDKSKNIDP
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggagccagatgaggaaaaatccccaaaatcgtctagtaaaccttccgattcatcttct
acaccggaaccggagaagaaaccgtccttgtcacagccattgattggttctcgaatgttc
cctccggggtcattgagtatggaggatttgagctactctgattctcctttgcctgcatca
gtcgcttctcctttaacggaattcggagcattctctgccacaaatgaatcagtttattct
cctttggagatgtatgaattcggagcaaatcctatatctgaaagagttcctacaggaaaa
tctagtgcagtagatacaggtgattacgcggaggagaacgttggggtgcctcatcctctt
gcgagcttacaggagattccgataccgccgtttctctcgaaaacttatgatctggtgtgt
gatcggtcgctggacccgataatctcgtggggaaccacaggggagagctttgtggtgtgg
gaccctgtggagttcgctagggtcatactgcctcggaatttcaagcacaacaatttctcc
agttttgttcggcaacttaatacttatgggttccgcaagattgatagtgataagtgggaa
tttgccaatgaagctttccggcgaggtgagagacacttgttgaagaatatccagaggcgc
aagtcaccccaatcccagcaggttggtagccataatgggccttttactgaagctggaaag
tcagaactggaaagtgagatagaaagattgaggaaagagaggagtatgatgatgcaagag
gttgtagaactgcagcaggagcagcatggagttgttcatcatgtgcaagcagtgcatcaa
aggcttcagggagcagagcagaggcagaagcagatgatttcattcttggcaaagttgttt
cagaatccagaattcttggcccgccttaggcaaaagaagaaacagggagatgttggttta
tcaaggataaagaggaagtttgtcaagcaccagcaacgtgaaccaggtcaatctgaatca
cctgcggaagggcatattgtgaagtacagacctgagtggacaaacctctcatcatccact
ctagtcccagatgtaagccctgctcctgttgaacaaacctgtgattacatcttccaagaa
atggtagaaatgggtaaagatgctgaaggcatggcttttcaacttgagaatgttccaccc
aatgagtctgccatatcagatgaactagcattagcacaaggatatatcaaaactctagag
cagtttcaagaaggcgaatcaaacttggggagtgaagatctgcagattaaaggaaagaat
gttatcagtccagaacaaaaagttcctcctgaatatcttgtttctttccctgaggacttg
gcaacagagaagaattttccagaattttcatctagtgggattgaaagacaggaggatgta
tggaccatgggatttgacaaccaagctggtatgtctagttctagtcaagagttatggggt
aatcttgtcaactatgatgtgccagagttaggatcaactggtggtttctcggatatctgg
gatttaggttctatacaagtggcaggaagttcaggtgttcagaactggcaggctgatgaa
catcctgttaatgagcctgacagtcatgctagccagccaggagatgataaatcaaagaat
atagatccatag
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