Manihot esculenta (cassava): 110620596
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Entry
110620596 CDS
T05761
Name
(RefSeq) amino acid transporter AVT1A
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
110620596
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mesc02000
]
110620596
Transporters [BR:
mesc02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
110620596
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Aa_trans
Motif
Other DBs
NCBI-GeneID:
110620596
NCBI-ProteinID:
XP_021620087
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Position
8:7023143..7029173
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AA seq
541 aa
AA seq
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MAEKDKEREAAAEFFSDDEDAGESLSGDLEGNKVIDIGGRNSSTSSDGEAADNGDECGTF
NSQQWPQSFRETVDSFSISVYPSLGSLGRGQSYLHSSFENCSKSYLEQDGKSPLLSDQEN
GRQKEESVRISAAHLSFSRGSFASGEFPIAHGCSVTQTVFNLVNVMVGAALLCTPSTVKE
AGWAGLVVLACFAFVCCYTANLMRHCFESKEGVLTYPDMGEAAFGKYGRLAISIILYTEL
YSYCVEFITLEGDNLTRLFPGTALHWAGFHLDSMHFFGILTALVVLPTFLLRDLRVISYL
SACGIVATIVIVLSVLLLGTAGGVGFHQTSPMVKWRGLPFATGVAGFCYSGHSVFPNIYQ
SMADKRKFTKAIIICYILCLMLYGGVAVMGFLMFGENTLSQFTLNMPPHAFSSKVALWTT
VINPLTKFALLMNPLARSIEELLPVRVSTNFLCFISLRTGLVFSTVCVAFLLPFFGLVMA
LIGSVLCLLVAVIIPPLCFLKIKGRKATRTQIILSYTIAALGISCATLGAYSSVLDIVNQ
Y
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaaagataaagagagagaagcagcagcagagtttttctcggatgatgaagat
gctggtgagagtcttagtggagacttagaagggaacaaggtaattgatattggtggtagg
aacagcagtaccagcagcgacggagaagcggctgataatggtgatgagtgtggaactttc
aactctcagcaatggccgcagagtttcagggaaactgtggattctttctcaatctcagtg
tatccaagcttgggatctcttggacgtggacaaagctaccttcattcaagttttgagaac
tgtagtaagagttatttagaacaggatgggaagtctcctttactgtctgatcaagaaaat
ggtcgtcagaaggaagagtcggttaggatttcagcagcacatttgtcattctctagaggt
tcctttgccagtggcgaatttcccattgctcatggatgtagtgtaacacaaactgtcttc
aatttggttaatgtaatggtcggagctgctcttctttgtacaccttctactgtgaaagaa
gcaggctgggcgggtttggtagtactagcttgtttcgcatttgtttgttgctacacagct
aaccttatgagacattgctttgaaagcaaagaaggtgtcctgacctacccagatatgggt
gaagctgctttcgggaaatatggacgtcttgctatatcaattatcctctatacggagtta
tattcatattgtgtggaatttattactttggagggtgataatcttaccaggctatttcct
ggaacggccttgcattgggctggctttcatcttgactccatgcacttctttggaatctta
accgctcttgttgttctgccgacttttttgctaagggatcttcgtgtcatatcatacctt
tcagcttgtggtattgtagcgacaattgtgattgttctctcagtgcttttgcttggcaca
gcagggggtgttggttttcatcaaaccagtcccatggtgaagtggagaggccttccattt
gctactggtgtggccgggttctgttattctgggcactcagtttttccaaatatctatcag
tcaatggctgacaaaagaaaatttacgaaggcaataataatatgctatatcttgtgctta
atgctttatgggggtgttgcggtcatgggatttctcatgttcggtgaaaatacactatct
caatttacattgaatatgccaccacatgccttctcttcaaaagttgccttgtggactaca
gttatcaacccacttaccaagtttgctctattgatgaacccattggccaggagcatagag
gagctactgccagttagagtatcaactaattttttgtgcttcatttctctaagaacagga
ttggtcttctcaactgtttgtgtggcttttcttcttcccttttttggtcttgtgatggct
ttaattggttctgtcctctgtctgcttgtggctgtaataataccaccattgtgttttcta
aagatcaaggggaggaaagctacaaggacacagattatattgagctacacaatagctgct
ttgggcatcagttgtgcaacccttggagcatactcttcagtgttggatattgtgaaccaa
tactga
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