KEGG   Manihot esculenta (cassava): 110620604
Entry
110620604         CDS       T05761                                 
Name
(RefSeq) transcriptional corepressor LEUNIG isoform X1
  KO
K14963  COMPASS component SWD3
Organism
mesc  Manihot esculenta (cassava)
Pathway
mesc03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    110620604
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mesc03036]
    110620604
Chromosome and associated proteins [BR:mesc03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    ATAC complex
     110620604
    NSL complex
     110620604
   HMT complexes
    COMPASS/SET1 complex
     110620604
    COMPASS/SET1 complex (yeast)
     110620604
    MLL-HCF complex
     110620604
    MLL3/MLL4 complex
     110620604
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     110620604
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_IFT122_1st WD40 Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_Gbeta Beta-prop_CAF1B_HIR1 EIF3I WDR55 Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_WDR36-Utp21_1st Beta-prop_Aladin WD40_MABP1-WDR62_1st CFAP251_N ANAPC4_WD40 DSE1_N WD_LRWD1 Beta-prop_RIG_2nd Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_Vps41 Beta-prop_WDR41 Beta-prop_SPT8 Beta-prop_WDR75_2nd B-prop_COPA_B_2nd TRM82_WD
Other DBs
NCBI-GeneID: 110620604
NCBI-ProteinID: XP_021620095
LinkDB
Position
8:complement(37263194..37266020)
AA seq 327 aa
MPRNQLGKRRKPMESSGIVPGDNAASNMDANNGFTFTEVNSAKASSMKVISCRFSADGKW
LATAGHDKKALLWYADGLKPKSTFEGHTSLITDVCFSPSMPYLATSSFDKTIRVWDAGNP
RSSLHIFRGHSTCVMSVDFHPNRDDLICSCDGGGDIRYWSIANSDCAAVFKGGSAHIRFQ
PRLGKYLAAAEDYAVSVLDVETQACLHLLQGHVKPIHFLCWDPSGKYIASVSKDAIRIWT
IGSGGNGECIHELSSDNGHIFHSCVFHPVNSSLLIIGCEQSLELWNMTTNKSTTLPAHGG
LVASLAVSTATRLVASASHDKFVKLWV
NT seq 984 nt   +upstreamnt  +downstreamnt
atgccaagaaaccagcttgggaagaggaggaaacctatggagtcatcaggaattgtccct
ggagataatgctgcttccaatatggatgccaacaatgggttcacatttactgaagtgaat
tctgctaaagccagttctatgaaagtaatctcttgccgcttctcggccgatggaaaatgg
cttgctactgctggccatgacaaaaaggctttgttgtggtatgctgatgggttaaagcca
aaatctacctttgaaggccatacatctttgattacagacgtctgtttcagtcccagcatg
ccatatcttgcgacatcttcattcgacaaaactataagggtctgggatgctggcaatcct
cgaagctcattacatatttttagaggacattctacttgtgttatgtcagtagactttcac
ccaaacagagatgatctcatctgctcttgtgatggtggtggcgatatacgctactggagt
attgccaacagcgactgtgcagcagtgttcaagggtggttcagctcacataagatttcaa
ccccgcctagggaagtatcttgctgcggctgaggattatgcagtgtctgtacttgatgtt
gagacacaagcttgtcttcatttactacagggacatgttaaaccgattcattttctgtgc
tgggatccttctggtaaatatatagcatctgttagcaaggatgctatcagaatctggaca
attggatcagggggaaatggagaatgcattcatgagttgagttctgataatggccacata
ttccactcctgtgtttttcatcctgtaaactcttcattgctaatcattggctgtgaacag
tctttggagctttggaacatgaccacgaacaagtctacgacccttccggctcatggagga
ttagttgcttcattagctgtatcaacagcgactcggttggttgcttctgctagtcatgat
aagtttgtcaagctgtgggtttga

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