Manihot esculenta (cassava): 110620612
Help
Entry
110620612 CDS
T05761
Name
(RefSeq) dystrophia myotonica WD repeat-containing protein
KO
K24741
WD repeat-containing protein 20
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mesc04990
]
110620612
Domain-containing proteins not elsewhere classified [BR:
mesc04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
110620612
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40
Beta-prop_TEP1_2nd
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
ANAPC4_WD40
Beta-prop_Nup120_160
Beta-prop_RIG_2nd
EIF3I
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_NUP159_NUP214
Cytochrom_D1
Beta-prop_Vps41
Beta-prop_WDR75_1st
PP2C_2
DUF2850
Motif
Other DBs
NCBI-GeneID:
110620612
NCBI-ProteinID:
XP_021620104
LinkDB
All DBs
Position
8:967889..974826
Genome browser
AA seq
547 aa
AA seq
DB search
MINTTNGMISTSSASGNTQSPGLKTYFKTPEGRYKLHYEKTHPSGLLHYAHGKTVTQVTL
ANLKDKPAPSTPTASSSSFSASSGVRSAAARLLGASNGSRALSFVGGNGGSKSISGSSRI
GSLGSSSSSNSMINTNFDGKGSYLVFNVGDAIFISDLNSQDKDPIKSIHFSNSNPVCHAF
DQDARDGHDLIIGLSSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSIAWVPG
GDGAFAVAHADGNVYVYEKSKDGAGDSSFPIIKDLSQFSVAHARYSKSNPISRWHICQGS
INSITFSTDGAYLATVGRDGYLRVFDYSREHLVCGGKSYYGALLCCAWSMDGKYILTGGE
DDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSSPTADGTGETIMYRFGSVGQDTQLL
LWDLEMDEIVVPLRRCPPGGSPTFSTGSQSSHWDSAVPVGTLQPAPSMRDVPKLSPLVAH
RVHTEPLSGLVFTQESVLTVCREGHIKIWMRPGVAESQSSNSETILISSLKDKPSLSSKV
GSSTYKQ
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgattaatacgaccaacggcatgatttcgacgtcatcggcatcggggaacacgcagtca
ccgggcctaaaaacctatttcaaaaccccggaggggcgttataagctccactacgagaag
acacacccttcaggtctgcttcattatgcccatggaaaaaccgttactcaggtaactctc
gctaatctcaaggacaagccagctccatcaacccctacagcctcaagttccagcttcagt
gctagcagtggagtccgatctgctgcagccaggttgttgggggctagtaatggaagccgt
gcgcttagctttgttggaggaaatggtgggagtaaaagcattagtggcagtagtaggatt
ggatcattgggttcctcaagttctagtaattctatgattaatacaaattttgatggaaaa
gggagttacttggtcttcaatgtgggggatgcaatctttataagtgacttaaactctcaa
gataaggatcccataaaatcaatacattttagtaattcaaacccagtttgtcatgccttt
gatcaagatgctagggatggacatgatttgattattgggttgagttctggtgatgtctac
tcagtgtcactgagacagcaattacaggatgttggaaagaagcttgttggggctcatcat
tataacaaagatggttccgtgaataacagccgttgtacgagtattgcatgggtgcctgga
ggtgatggtgcttttgctgttgctcatgcagatgggaatgtatatgtgtatgagaagagc
aaggatggtgcaggtgattcttcattccccattatcaaagatctatctcagttttctgtt
gcacatgcgcgttatagtaagagtaaccccatctccagatggcatatttgccaaggttca
attaacagcatcacattctcaacagatggggcatacttagcaactgttggaagagatggt
tatttacgagtttttgactactccagggaacatctagtatgtggtgggaaaagttactat
ggtgctctgctgtgttgtgcttggagcatggatggcaaatacatcttgactggaggtgaa
gatgatttagttcaagtttggagcatggaagatcggaaggtcgtagcgtggggtgagggt
cacaactcatgggtgagtggagtggcttttgattcatattggtcgtcaccaactgcagat
ggtaccggagaaactataatgtatcggtttggatctgttggtcaggacacacagttgctg
ttgtgggacttagaaatggatgagattgttgtgccattacgtcgatgccctcctggtgga
tctcccactttcagtacaggaagtcagtcttcacattgggacagtgctgttccagttggc
accctgcaacctgctccaagcatgcgagacgtaccaaagctttccccactagttgctcat
cgtgttcacactgaaccactttccggtttggtatttactcaagaatctgttcttactgtc
tgtcgggagggccacataaaaatctggatgagacctggggttgcggaaagccagtcaagc
aattctgaaaccattttaattagcagtttgaaggacaagccttcattgtcgagcaaggtt
ggtagttctacttataagcaatga
DBGET
integrated database retrieval system
