Manihot esculenta (cassava): 110620618
Help
Entry
110620618 CDS
T05761
Name
(RefSeq) indole-3-acetic acid-amido synthetase GH3.17
KO
K14487
auxin responsive GH3 gene family
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
110620618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GH3
GH3_C
GH3_M
Antimicrobial14
Motif
Other DBs
NCBI-GeneID:
110620618
NCBI-ProteinID:
XP_021620112
LinkDB
All DBs
Position
8:complement(33374791..33377416)
Genome browser
AA seq
613 aa
AA seq
DB search
MLPSYDPNDNEAGLQLLEDLTTNASQIQQQVLEEILTKNANTEYLKGFLHGLSDKENFKK
KVPIVNYEDIRPFIERIANGEPSTVISSQPITELLTSSGTSGGLPKMMPSTAEDLDRKTL
FYNLLVPIMNKYMDGLDQGKGMYLLFIKPEISTPCGLMARPVLTSYYKSSNFRNRPFNRY
NVYTSPDETILCPDSKQSMYCQLLCGLLQRDDVLRVGAIFASAFLRAIKFLEDYWRELCS
NIRTGCISDWINDPDCRNAVSSILKSPNSELADLIEYECSNKSWEGIIKKLWPRTKYIEV
IVTGSMAQYITTLEFYSGGLPLVSTMYASSECYFGINFKPLSTPSDVCYTLLPNMAYFEF
LPVERENGDVIQDLQYNGVSDQNCIHKEDELKKKKHMETVDLVDVKLGHYYELVVTTFTG
LYRYRVGDILMVTGFNMNAPQFRFVHRRNVVLSIDTDKTNEEDLLKAVTQAKILLEPLGF
LLTEYTSFADTSSIPGHYVLFWELKARGNNEPGELDHIIMEQCCSKVEESLDSVYRRCRK
KDKSIGPLEIRVVKHGTFDALMDFCLSQGSSVNQYKTPRCIKSEAALNILDSRVVGNFFS
KKTPFWEPFRMQN
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgttgccaagctatgatccaaatgacaatgaagcaggcttgcagcttttggaagacctg
acaacaaatgcaagtcaaatacaacagcaggtgttagaggagatactaacaaaaaatgca
aatacagaatatcttaagggcttcctccatggcctttctgataaggagaacttcaagaag
aaagtacccattgtaaattatgaagatatcaggcctttcatcgagcgaattgccaatgga
gagccttccactgtcatttcatcccagccaatcactgagctcctcacaagctccggcact
tcaggaggactgccgaaaatgatgccttcaactgctgaagatttggacaggaagacatta
ttctacaacctccttgtgcctataatgaataaatatatggatggcttggaccagggaaaa
ggaatgtaccttttgtttatcaaacctgaaatcagcaccccttgtggcttgatggctaga
cctgttttaaccagctattacaagagcagcaacttcagaaaccggccattcaaccggtac
aacgtttatacaagccctgatgagacaatattgtgtcctgacagcaagcagagtatgtac
tgccaattactttgtggattattgcagcgtgatgatgtcttaagggtcggtgcaattttt
gcatcagctttcttgcgggctatcaaattcttggaggattactggagagaattatgctcc
aatataagaacaggttgcatcagtgactggattaatgaccctgattgcagaaacgctgtt
tcatcaatcttgaaaagcccgaattcagaattggctgatttgattgagtatgaatgtagt
aacaaatcatgggaagggataattaaaaagctttggcctagaacaaagtacattgaagtc
attgttacaggttccatggcccaatacataacaactcttgaattttacagtggtgggctc
cctttagtttcaaccatgtatgcttcttctgaatgttactttgggatcaacttcaagcca
ctgagcacaccttctgatgtctgttacaccctcctcccaaatatggcttactttgaattt
ctacctgttgagagagaaaatggagacgtgatacaggatttacaatacaatggcgtttct
gatcagaattgcatacacaaggaagatgagctgaagaagaagaaacacatggaaactgtg
gatcttgtagatgtcaagctaggccactactacgagcttgtggtcactacttttacaggg
ctatacagatacagagtcggagacattcttatggtgacaggcttcaatatgaatgcccct
caattcagatttgttcaccggagaaatgtggtattaagcattgatactgacaaaaccaat
gaagaagacctattaaaggcagtgacacaagcaaagattctgctcgaaccacttggtttc
cttctcaccgagtacaccagctttgcagacacttcctcaatcccaggtcactacgtacta
ttctgggaactcaaagcgagaggaaataatgaaccaggggagcttgatcatataataatg
gagcaatgctgctccaaagtagaagaatcgctggattctgtttacaggaggtgcaggaag
aaggacaagtcaattggacccctggagataagggtggtgaaacatggaacatttgatgcg
ctcatggatttctgtctctctcagggatcctctgttaatcaatacaagacaccaaggtgc
atcaaatccgaggcagctctaaatattttggattcaagggtggtgggaaattttttcagc
aagaaaactcctttctgggagccattcagaatgcaaaactaa
DBGET
integrated database retrieval system
